Detailed information NTG0058040

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: STO1_RS01590
• Genome accession: NZ_AP018338
• Coordinates: 309340..311445 (+)
• Length: 701 a.a.
• NCBI ID: WP_096421659.1
• Uniprot ID: -
• Organism: Streptococcus oralis subsp. tigurinus strain osk_001
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 304340..316445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STO1_RS01585 (STO1_003090)	-	304818..308888 (+)	4071	WP_096421657.1	Spy0128 family protein	-
STO1_RS01590 (STO1_003100)	clpE	309340..311445 (+)	2106	WP_096421659.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
STO1_RS01595 (STO1_003110)	-	311504..311986 (-)	483	WP_000032557.1	S-ribosylhomocysteine lyase	-
STO1_RS01600 (STO1_003120)	-	312273..312980 (+)	708	WP_084872489.1	ABC transporter ATP-binding protein	-
STO1_RS01605 (STO1_003130)	-	312982..313770 (+)	789	WP_061588731.1	ABC transporter permease	-
STO1_RS01610 (STO1_003140)	-	313770..314492 (+)	723	WP_096421661.1	lantibiotic ABC transporter permease	-
STO1_RS01615 (STO1_003150)	-	314505..315203 (+)	699	WP_084872493.1	response regulator transcription factor	-
STO1_RS01620 (STO1_003160)	-	315170..316201 (+)	1032	WP_096421663.1	sensor histidine kinase	-

Sequence

Protein

• Length: 701 a.a.
• Molecular weight: 77596.40 Da
• Isoelectric Point: 4.7685

>NTDB_id=58040 STO1_RS01590 WP_096421659.1 309340..311445(+) (clpE) [Streptococcus oralis subsp. tigurinus strain osk_001]
MNNNFNNFNNMDDLFNQLMGGMRGYSSENRRYLINGREVTPEEFAHYRATGQLPGNAESDVQMQQHASGMKQDGVLAKLG
RNLTAEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGL
EAGTQYRGSFEENVQNLINEVKEAGNIILFFDEIHQILGAGSIGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTFKILQGIRDLYQQHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEREIEAEKDKQEKAVEAEDFEAALNAKTRIAELEKKVENHTEDMKVTANINDVAESVERMTGIPVSQMGA
SDIERLKDMAHRLEHKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLNKEDLSKIVDLMLAEVNQTLAKKDIDLEVS
QAAKDFITEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDHLDAKHLEADMEDGVLVIREKA

Nucleotide

• Length: 2106 bp

>NTDB_id=58040 STO1_RS01590 WP_096421659.1 309340..311445(+) (clpE) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGAACAACAACTTTAATAACTTTAACAACATGGATGATTTATTTAACCAATTGATGGGTGGTATGCGAGGATACAGTTC
TGAAAACCGTCGCTACTTGATTAATGGACGTGAAGTGACACCTGAGGAATTTGCTCACTATCGTGCAACTGGTCAATTGC
CAGGAAATGCAGAATCTGATGTGCAAATGCAACAACACGCTTCAGGTATGAAACAAGACGGTGTCCTTGCTAAACTAGGT
CGTAACTTGACCGCAGAAGCTCGTGAGGGCAAGTTGGATCCTGTTATCGGACGAAACAAGGAAATTCAAGAAACATCTGA
AATCCTCTCACGTCGTACGAAAAATAATCCTGTTCTGGTCGGAGATGCAGGTGTTGGTAAGACAGCCGTTGTAGAAGGTC
TAGCACAAGCGATTGTGAATGGAGATGTTCCGGCTGCCATCAAGAACAAGGAAATTATTTCCATTGACATCTCAGGTCTT
GAGGCTGGTACTCAATACCGTGGTAGCTTTGAAGAAAACGTTCAAAATCTAATCAATGAAGTAAAAGAAGCAGGGAATAT
TATCCTCTTCTTTGATGAAATTCACCAAATCCTTGGCGCTGGCTCAATCGGAGGAGACAGTGGTTCTAAAGGGCTTGCGG
ACATTCTCAAGCCAGCTCTCTCTCGTGGTGAATTGACCGTTATTGGAGCGACAACTCAAGACGAATACCGTAACACCATC
TTGAAAAATGCAGCTCTTGCTCGTCGTTTCAACGAAGTGAAGGTCAATGCTCCTTCAGCAGAGGATACCTTTAAAATCCT
TCAAGGGATTCGTGACCTCTATCAACAACACCACAATGTTATCTTGCCAGATGAAGTCTTGAAAGCAGCAGTGGATTATT
CTATCCAATACATTCCACAACGCAGCTTGCCAGATAAGGCTATTGACCTTGTAGACGTAACGGCTGCTCACTTGGCAGCT
CAACATCCTGTAACAGATGTGCATGCTGTTGAACGGGAAATTGAGGCAGAAAAAGACAAGCAAGAAAAAGCAGTTGAGGC
AGAAGATTTTGAAGCAGCTCTCAATGCCAAAACACGTATTGCAGAATTAGAGAAAAAAGTCGAAAACCACACAGAAGACA
TGAAAGTGACTGCAAACATCAACGATGTGGCTGAATCTGTGGAACGAATGACTGGTATTCCAGTTTCACAAATGGGAGCA
TCAGATATCGAACGTTTGAAAGATATGGCTCATCGCTTGGAACACAAGGTTATCGGCCAAGACAAGGCGGTTGAAGCTGT
AGCTCGTGCTATCCGTCGTAACCGTGCTGGTTTTGATGAAGGCAATCGCCCAATCGGTAGCTTCCTCTTTGTAGGTCCAA
CTGGGGTTGGTAAGACAGAACTTGCTAAGCAATTAGCGCTCGATATGTTTGGTACTAAAGATGCGATCATCCGCTTGGAT
ATGTCTGAATACAGTGACCGCACAGCCGTATCTAAATTAATCGGTACAACAGCAGGTTATGTTGGGTATGATGACAATAG
CAATACCTTGACAGAACGTGTTCGTCGCAATCCTTATTCTATCATTCTCTTGGACGAAATTGAAAAGGCTGATCCTCAAG
TAATCACCCTTCTCCTCCAAGTATTGGATGACGGTCGTTTGACTGATGGTCAAGGAAATACAGTGAACTTCAAGAACACG
GTCATTATCGCGACATCAAATGCTGGATTTGGTTATGAAGCCAACTTGACAGAAGATGCGGACAAACCAGAGTTGATGGA
TCGTTTGAAACCATTCTTCCGTCCAGAATTCCTCAACCGCTTTAACGCAGTTATCGAGTTTTCACACTTGAACAAGGAAG
ATCTTTCTAAGATTGTGGACTTGATGTTGGCTGAAGTCAACCAAACTTTGGCTAAGAAAGACATTGATTTGGAAGTCAGC
CAAGCAGCTAAGGACTTTATCACAGAAGAAGGCTATGACGAAGTTATGGGGGTTCGTCCTCTCCGTCGCGTGGTTGAACA
ACAAATTCGTGATAAAGTAACAGACTTCCACTTGGATCATCTAGATGCCAAACATTTGGAAGCAGACATGGAAGATGGCG
TTTTGGTCATTCGTGAAAAAGCCTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (443-603)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (610-680)

• AAA lid domain (AAA_lid_9) (259-354)

• ATPase family associated with various cellular activities (AAA) (AAA) (118-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	50.621	91.869	0.465
clpC	Lactococcus lactis subsp. cremoris KW2	50.156	91.298	0.458
clpE	Streptococcus pneumoniae Rx1	48.819	90.585	0.442
clpE	Streptococcus pneumoniae D39	48.819	90.585	0.442
clpE	Streptococcus pneumoniae R6	48.819	90.585	0.442
clpE	Streptococcus pneumoniae TIGR4	48.738	90.442	0.441
clpC	Bacillus subtilis subsp. subtilis str. 168	45.146	92.582	0.418
clpC	Streptococcus pneumoniae D39	43.269	89.016	0.385
clpC	Streptococcus pneumoniae Rx1	43.269	89.016	0.385
clpC	Streptococcus pneumoniae TIGR4	43.109	89.016	0.384
clpC	Streptococcus thermophilus LMD-9	43.274	88.017	0.381
clpC	Streptococcus thermophilus LMG 18311	43.112	88.017	0.379
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.626	88.017	0.375
clpC	Streptococcus mutans UA159	42.233	88.16	0.372