Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | I6L85_RS07310 | Genome accession | NZ_CP077248 |
| Coordinates | 1474214..1476445 (+) | Length | 743 a.a. |
| NCBI ID | WP_111723429.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain FDAARGOS 1455 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1469214..1481445
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L85_RS07280 (I6L85_07280) | - | 1469338..1469550 (-) | 213 | WP_008809086.1 | exodeoxyribonuclease VII small subunit | - |
| I6L85_RS07285 (I6L85_07285) | xseA | 1469528..1470868 (-) | 1341 | WP_111723433.1 | exodeoxyribonuclease VII large subunit | - |
| I6L85_RS07290 (I6L85_07290) | - | 1471023..1471865 (-) | 843 | WP_111723432.1 | NAD(P)H-hydrate dehydratase | - |
| I6L85_RS07295 (I6L85_07295) | - | 1471973..1472746 (-) | 774 | WP_111723431.1 | HAD hydrolase family protein | - |
| I6L85_RS07300 (I6L85_07300) | - | 1472743..1473597 (-) | 855 | WP_111723430.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| I6L85_RS07305 (I6L85_07305) | - | 1473731..1473961 (-) | 231 | WP_008809091.1 | DUF1797 family protein | - |
| I6L85_RS07310 (I6L85_07310) | clpE | 1474214..1476445 (+) | 2232 | WP_111723429.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| I6L85_RS07315 (I6L85_07315) | - | 1476526..1477131 (-) | 606 | WP_111723428.1 | GyrI-like domain-containing protein | - |
| I6L85_RS07320 (I6L85_07320) | - | 1477191..1478081 (-) | 891 | WP_111723427.1 | YafY family protein | - |
| I6L85_RS07325 (I6L85_07325) | - | 1478241..1478693 (+) | 453 | WP_111723426.1 | NUDIX hydrolase | - |
| I6L85_RS07330 (I6L85_07330) | - | 1478792..1479091 (+) | 300 | WP_045773849.1 | DUF1827 family protein | - |
| I6L85_RS07335 (I6L85_07335) | - | 1479128..1479565 (-) | 438 | WP_082307108.1 | GNAT family N-acetyltransferase | - |
| I6L85_RS07340 (I6L85_07340) | - | 1479588..1480043 (+) | 456 | WP_111723425.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 743 a.a. Molecular weight: 82875.96 Da Isoelectric Point: 5.0200
>NTDB_id=580283 I6L85_RS07310 WP_111723429.1 1474214..1476445(+) (clpE) [Streptococcus gordonii strain FDAARGOS 1455]
MLCQNCKINESTIHLYTNVNGKKQQVDLCQNCYQIMKTDPNNSLLGGLTNMNNHNMDPFDDFFNHLGNFQGPKDSTPPTQ
SGGSYGGGNYGPGSNNQRPQSASNKPKGLLEEFGINVTEIARRGDIDPVIGRDDEIRRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPQKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRNRNDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVRYTDEAIEA
AAILSNRYIQDRFLPDKAIDLLDESGSKMNLTLNFVDPKEIDRRLIEAENLKTQATRDEDYEKAAYFRDQIAKYKEMQTA
KIDEQDTPIISEKEIEAIVEQKTNIPVGDLKEKEQSQLIHLASDLKSHVIGQDDAVDKIAKAIRRNRVGLGSPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYEEAGQLTERVRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKALSKDNLLQIVDLMLEDVNNRLASNEIHLDVTTKVKEKLVDLGYDPKMGARPLRRTIQDYIEDAITDYYLEHPTDK
DLKAIMTSNGKIIIKGKQKAELD
MLCQNCKINESTIHLYTNVNGKKQQVDLCQNCYQIMKTDPNNSLLGGLTNMNNHNMDPFDDFFNHLGNFQGPKDSTPPTQ
SGGSYGGGNYGPGSNNQRPQSASNKPKGLLEEFGINVTEIARRGDIDPVIGRDDEIRRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPQKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRNRNDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVRYTDEAIEA
AAILSNRYIQDRFLPDKAIDLLDESGSKMNLTLNFVDPKEIDRRLIEAENLKTQATRDEDYEKAAYFRDQIAKYKEMQTA
KIDEQDTPIISEKEIEAIVEQKTNIPVGDLKEKEQSQLIHLASDLKSHVIGQDDAVDKIAKAIRRNRVGLGSPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYEEAGQLTERVRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKALSKDNLLQIVDLMLEDVNNRLASNEIHLDVTTKVKEKLVDLGYDPKMGARPLRRTIQDYIEDAITDYYLEHPTDK
DLKAIMTSNGKIIIKGKQKAELD
Nucleotide
Download Length: 2232 bp
>NTDB_id=580283 I6L85_RS07310 WP_111723429.1 1474214..1476445(+) (clpE) [Streptococcus gordonii strain FDAARGOS 1455]
ATGCTTTGTCAAAACTGTAAAATCAATGAATCTACCATTCATTTATACACTAATGTAAATGGTAAAAAACAACAAGTCGA
CCTCTGTCAAAATTGCTATCAGATTATGAAAACTGATCCAAATAACTCTCTTTTGGGTGGACTAACGAACATGAATAATC
ATAATATGGATCCTTTTGATGATTTCTTTAATCATCTGGGGAATTTCCAAGGGCCGAAGGATTCTACCCCTCCAACTCAA
TCAGGTGGTAGTTATGGAGGGGGCAACTATGGTCCTGGTTCTAATAACCAGCGTCCTCAGTCAGCCTCCAATAAACCAAA
AGGTCTTTTGGAAGAGTTTGGTATTAACGTTACAGAAATTGCTCGACGTGGTGATATTGATCCAGTGATTGGACGAGATG
ATGAAATTCGTCGTGTTATAGAAATTCTCAATCGCCGAACTAAGAACAATCCAGTCCTTATCGGTGAACCTGGTGTCGGA
AAGACTGCTGTTGTGGAGGGCTTGGCTCAAAAAATAGTCGACGGTGATGTTCCTCAAAAATTGCAAGGAAAAGAGGTCAT
TCGGCTCGATGTTGTCAGCCTTGTTCAAGGAACTGGTATTCGCGGGCAATTTGAAGAACGAATGCAAAAACTCATGGATG
AGATTCGCAATCGCAATGATATCATTCTCTTTATTGATGAAATCCATGAAATTGTTGGAGCTGGTTCTGCGGGCGATGGG
AACATGGATGCTGGAAATATTCTCAAACCTGCTCTTGCTCGAGGTGAACTTCAACTGGTTGGAGCTACTACTCTCAATGA
ATATCGTATCATTGAAAAAGATGCAGCTTTAGAAAGACGGATGCAACCAGTCAAAGTAGATGAACCAACCGTAGAAGAAA
CGATCACAATTCTAAAGGGAATTCAAAAGAAATACGAAGATTACCACCATGTTCGCTACACAGATGAAGCTATTGAAGCT
GCTGCCATCCTATCCAATCGTTATATTCAGGACCGTTTCCTTCCCGATAAAGCTATTGATCTTTTGGATGAATCAGGATC
TAAGATGAACCTAACCCTCAATTTTGTTGATCCAAAAGAAATTGACAGACGCTTGATAGAGGCTGAAAATCTGAAAACAC
AGGCCACTCGCGATGAAGATTACGAAAAAGCAGCCTACTTCCGCGACCAAATTGCCAAATATAAGGAAATGCAAACTGCT
AAAATAGATGAACAAGATACTCCTATCATCAGTGAGAAGGAGATCGAAGCTATTGTCGAGCAAAAAACAAATATTCCTGT
TGGGGATTTGAAGGAAAAAGAGCAGTCTCAGCTTATTCATTTAGCCAGTGATTTGAAGTCTCATGTCATTGGGCAGGATG
ATGCTGTTGATAAGATTGCAAAAGCCATCCGTCGTAATCGTGTGGGATTAGGCAGTCCAAACCGGCCAATCGGAAGTTTC
CTTTTTGTTGGACCGACAGGCGTTGGAAAAACTGAACTTTCCAAACAATTGGCCATCGAACTTTTTGGCTCTGCCGATAG
CATGATTCGTTTTGATATGAGTGAATACATGGAAAAACATAGCGTTGCCAAACTTGTGGGAGCACCTCCAGGCTACGTTG
GCTATGAAGAAGCAGGCCAGTTGACTGAACGTGTTCGTCGTAATCCATACTCACTCATTCTCCTAGATGAGGTGGAAAAA
GCTCATCCAGATGTCATGCATATGTTCTTACAAGTCCTAGATGATGGACGTTTGACTGATGGTCAAGGCAGGACAGTCAG
CTTCAAAGATACCATTATTATCATGACTTCCAATGCAGGAACTGGCAAAGTGGAAGCTAGCGTTGGCTTTGGTGCTGCTC
GAGAAGGTCGGACAAATTCTGTCTTAGGTGAGTTAGGTAACTTCTTTAGTCCAGAATTCATGAATCGATTTGATGGTATC
ATTGAATTCAAGGCATTAAGCAAGGATAATCTCTTACAGATTGTGGATCTAATGCTGGAAGATGTTAATAATCGACTCGC
TAGCAACGAAATTCATCTAGATGTAACAACTAAAGTCAAAGAAAAATTGGTTGATCTGGGCTACGATCCTAAGATGGGGG
CACGACCACTCCGTAGAACTATTCAGGATTATATCGAAGATGCTATTACGGACTACTACCTAGAACATCCGACAGATAAG
GATTTAAAAGCAATTATGACTAGCAATGGCAAGATTATAATTAAGGGTAAACAAAAAGCTGAGCTTGATTAA
ATGCTTTGTCAAAACTGTAAAATCAATGAATCTACCATTCATTTATACACTAATGTAAATGGTAAAAAACAACAAGTCGA
CCTCTGTCAAAATTGCTATCAGATTATGAAAACTGATCCAAATAACTCTCTTTTGGGTGGACTAACGAACATGAATAATC
ATAATATGGATCCTTTTGATGATTTCTTTAATCATCTGGGGAATTTCCAAGGGCCGAAGGATTCTACCCCTCCAACTCAA
TCAGGTGGTAGTTATGGAGGGGGCAACTATGGTCCTGGTTCTAATAACCAGCGTCCTCAGTCAGCCTCCAATAAACCAAA
AGGTCTTTTGGAAGAGTTTGGTATTAACGTTACAGAAATTGCTCGACGTGGTGATATTGATCCAGTGATTGGACGAGATG
ATGAAATTCGTCGTGTTATAGAAATTCTCAATCGCCGAACTAAGAACAATCCAGTCCTTATCGGTGAACCTGGTGTCGGA
AAGACTGCTGTTGTGGAGGGCTTGGCTCAAAAAATAGTCGACGGTGATGTTCCTCAAAAATTGCAAGGAAAAGAGGTCAT
TCGGCTCGATGTTGTCAGCCTTGTTCAAGGAACTGGTATTCGCGGGCAATTTGAAGAACGAATGCAAAAACTCATGGATG
AGATTCGCAATCGCAATGATATCATTCTCTTTATTGATGAAATCCATGAAATTGTTGGAGCTGGTTCTGCGGGCGATGGG
AACATGGATGCTGGAAATATTCTCAAACCTGCTCTTGCTCGAGGTGAACTTCAACTGGTTGGAGCTACTACTCTCAATGA
ATATCGTATCATTGAAAAAGATGCAGCTTTAGAAAGACGGATGCAACCAGTCAAAGTAGATGAACCAACCGTAGAAGAAA
CGATCACAATTCTAAAGGGAATTCAAAAGAAATACGAAGATTACCACCATGTTCGCTACACAGATGAAGCTATTGAAGCT
GCTGCCATCCTATCCAATCGTTATATTCAGGACCGTTTCCTTCCCGATAAAGCTATTGATCTTTTGGATGAATCAGGATC
TAAGATGAACCTAACCCTCAATTTTGTTGATCCAAAAGAAATTGACAGACGCTTGATAGAGGCTGAAAATCTGAAAACAC
AGGCCACTCGCGATGAAGATTACGAAAAAGCAGCCTACTTCCGCGACCAAATTGCCAAATATAAGGAAATGCAAACTGCT
AAAATAGATGAACAAGATACTCCTATCATCAGTGAGAAGGAGATCGAAGCTATTGTCGAGCAAAAAACAAATATTCCTGT
TGGGGATTTGAAGGAAAAAGAGCAGTCTCAGCTTATTCATTTAGCCAGTGATTTGAAGTCTCATGTCATTGGGCAGGATG
ATGCTGTTGATAAGATTGCAAAAGCCATCCGTCGTAATCGTGTGGGATTAGGCAGTCCAAACCGGCCAATCGGAAGTTTC
CTTTTTGTTGGACCGACAGGCGTTGGAAAAACTGAACTTTCCAAACAATTGGCCATCGAACTTTTTGGCTCTGCCGATAG
CATGATTCGTTTTGATATGAGTGAATACATGGAAAAACATAGCGTTGCCAAACTTGTGGGAGCACCTCCAGGCTACGTTG
GCTATGAAGAAGCAGGCCAGTTGACTGAACGTGTTCGTCGTAATCCATACTCACTCATTCTCCTAGATGAGGTGGAAAAA
GCTCATCCAGATGTCATGCATATGTTCTTACAAGTCCTAGATGATGGACGTTTGACTGATGGTCAAGGCAGGACAGTCAG
CTTCAAAGATACCATTATTATCATGACTTCCAATGCAGGAACTGGCAAAGTGGAAGCTAGCGTTGGCTTTGGTGCTGCTC
GAGAAGGTCGGACAAATTCTGTCTTAGGTGAGTTAGGTAACTTCTTTAGTCCAGAATTCATGAATCGATTTGATGGTATC
ATTGAATTCAAGGCATTAAGCAAGGATAATCTCTTACAGATTGTGGATCTAATGCTGGAAGATGTTAATAATCGACTCGC
TAGCAACGAAATTCATCTAGATGTAACAACTAAAGTCAAAGAAAAATTGGTTGATCTGGGCTACGATCCTAAGATGGGGG
CACGACCACTCCGTAGAACTATTCAGGATTATATCGAAGATGCTATTACGGACTACTACCTAGAACATCCGACAGATAAG
GATTTAAAAGCAATTATGACTAGCAATGGCAAGATTATAATTAAGGGTAAACAAAAAGCTGAGCTTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
86.997 |
100 |
0.873 |
| clpE | Streptococcus pneumoniae D39 |
86.997 |
100 |
0.873 |
| clpE | Streptococcus pneumoniae R6 |
86.997 |
100 |
0.873 |
| clpE | Streptococcus pneumoniae TIGR4 |
86.863 |
100 |
0.872 |
| clpE | Streptococcus mutans UA159 |
85.121 |
100 |
0.855 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
78.273 |
99.731 |
0.781 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.444 |
90.983 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
47.84 |
84.118 |
0.402 |
| clpC | Streptococcus pneumoniae D39 |
47.84 |
84.118 |
0.402 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.68 |
84.118 |
0.401 |
| clpC | Streptococcus thermophilus LMD-9 |
45.137 |
88.56 |
0.4 |
| clpC | Streptococcus mutans UA159 |
46.406 |
86.137 |
0.4 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.761 |
85.195 |
0.398 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.833 |
88.56 |
0.397 |