Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   I6L85_RS02745 Genome accession   NZ_CP077248
Coordinates   530419..531129 (-) Length   236 a.a.
NCBI ID   WP_111724015.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1455     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 525419..536129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L85_RS02730 (I6L85_02730) - 526288..527934 (+) 1647 WP_111724018.1 phosphoenolpyruvate carboxykinase (ATP) -
  I6L85_RS02735 (I6L85_02735) - 528026..529366 (+) 1341 WP_111724017.1 hemolysin family protein -
  I6L85_RS02740 (I6L85_02740) - 529598..530128 (+) 531 WP_231872493.1 hypothetical protein -
  I6L85_RS02745 (I6L85_02745) treR 530419..531129 (-) 711 WP_111724015.1 trehalose operon repressor Regulator
  I6L85_RS02750 (I6L85_02750) treP 531309..533318 (+) 2010 WP_111724014.1 PTS system trehalose-specific EIIBC component -
  I6L85_RS02755 (I6L85_02755) treC 533453..535078 (+) 1626 WP_172455847.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27725.88 Da        Isoelectric Point: 9.3050

>NTDB_id=580265 I6L85_RS02745 WP_111724015.1 530419..531129(-) (treR) [Streptococcus gordonii strain FDAARGOS 1455]
MKKYQQLFKLIEQDILSEKYPVGEFLPSENELTQIYKVSRDTVRKALEQLQKEGLIQKFKGQGSKIIKQEHINFPISNLT
SYQELVLQNKLDSKTNVISLEKITVDKKLAKLTGFPEYRLVWRIIRQRVVDQVASVLDIDYLDKELVPTMTREIAEHSIY
HFIENDLGLSIDYAKKEITIDHATSRDKILLDIERENHVVSVKSQVYLANGQQFQFTDSRHKLDKFRFVDFAKRHN

Nucleotide


Download         Length: 711 bp        

>NTDB_id=580265 I6L85_RS02745 WP_111724015.1 530419..531129(-) (treR) [Streptococcus gordonii strain FDAARGOS 1455]
ATGAAGAAATACCAACAATTATTTAAACTAATCGAGCAAGATATCCTGAGCGAGAAATACCCCGTTGGTGAATTTTTGCC
AAGCGAGAATGAATTAACTCAGATTTATAAAGTCAGCCGTGATACTGTCCGAAAAGCTCTGGAGCAACTTCAAAAAGAAG
GATTAATCCAAAAATTTAAGGGACAAGGATCCAAAATCATCAAACAGGAACACATCAATTTTCCAATCTCCAATCTGACT
AGCTACCAGGAACTCGTCCTACAAAATAAACTAGACTCTAAAACCAATGTCATCAGCCTAGAAAAGATAACTGTAGATAA
AAAACTTGCCAAGCTAACTGGTTTCCCAGAATATCGCTTGGTTTGGCGAATCATTCGACAAAGAGTTGTTGATCAAGTTG
CTTCTGTACTTGATATTGATTATTTAGATAAAGAGCTTGTCCCTACGATGACGAGAGAAATTGCAGAGCATTCCATCTAT
CATTTCATTGAAAATGATCTTGGACTTAGCATCGACTATGCTAAAAAGGAAATCACCATTGATCATGCGACCAGTCGAGA
TAAAATTTTGCTCGATATTGAGAGAGAAAACCATGTCGTTTCCGTCAAATCTCAGGTTTATTTAGCGAACGGGCAGCAAT
TTCAGTTCACAGACAGCAGACACAAACTCGATAAATTTCGCTTTGTTGATTTTGCCAAAAGGCACAACTAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

65.106

99.576

0.648