Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | I6L85_RS00860 | Genome accession | NZ_CP077248 |
| Coordinates | 164792..167221 (+) | Length | 809 a.a. |
| NCBI ID | WP_111724200.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain FDAARGOS 1455 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 159792..172221
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L85_RS00840 (I6L85_00840) | rpsB | 161646..162428 (+) | 783 | WP_008809924.1 | 30S ribosomal protein S2 | - |
| I6L85_RS00845 (I6L85_00845) | tsf | 162507..163550 (+) | 1044 | WP_012130978.1 | translation elongation factor Ts | - |
| I6L85_RS00850 (I6L85_00850) | - | 163658..164008 (-) | 351 | WP_111724201.1 | hypothetical protein | - |
| I6L85_RS00855 (I6L85_00855) | - | 164327..164785 (+) | 459 | WP_061601415.1 | CtsR family transcriptional regulator | - |
| I6L85_RS00860 (I6L85_00860) | clpC | 164792..167221 (+) | 2430 | WP_111724200.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| I6L85_RS00865 (I6L85_00865) | - | 167435..168493 (+) | 1059 | WP_111724199.1 | AAA family ATPase | - |
| I6L85_RS00870 (I6L85_00870) | pnuC | 168515..169330 (+) | 816 | WP_111724198.1 | nicotinamide riboside transporter PnuC | - |
| I6L85_RS00875 (I6L85_00875) | - | 169374..170162 (+) | 789 | WP_111724197.1 | NUDIX hydrolase | - |
| I6L85_RS00880 (I6L85_00880) | - | 170398..171072 (+) | 675 | WP_008809916.1 | DUF6287 domain-containing protein | - |
| I6L85_RS00885 (I6L85_00885) | dusB | 171111..172088 (-) | 978 | WP_008809915.1 | tRNA dihydrouridine synthase DusB | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90100.85 Da Isoelectric Point: 6.5942
>NTDB_id=580237 I6L85_RS00860 WP_111724200.1 164792..167221(+) (clpC) [Streptococcus gordonii strain FDAARGOS 1455]
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLDPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALAFGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLGRLIKEENQPLSSNLKVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGTFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMVKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLDPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALAFGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLGRLIKEENQPLSSNLKVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGTFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMVKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
Nucleotide
Download Length: 2430 bp
>NTDB_id=580237 I6L85_RS00860 WP_111724200.1 164792..167221(+) (clpC) [Streptococcus gordonii strain FDAARGOS 1455]
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAGGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCAATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
CATCTTATACGCTATCATCAGCGACAGAGGAACCCTAGCAACTCGTATTTTAGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGGAGAAACCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGATCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTTTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCGCACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTGGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAACGTATGAACAATATCATTGACGATA
TTGAGAAAGATGGTAAGGTCATCCTCTTTATCGATGAGCTTCATACGATTATGGGGTCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGACGCTTCGCTAAGATCAGCATTGAAGAGCCAAGTGTGGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCAATTGAAACA
GCTGTGAAATATGCTCATCGTTACTTGACAAGCAAGCATCTGCCGGATTCAGCAATTGATCTGTTAGATGAAGCTAGTGC
TACAGTGCGTAACAATGGTCCCCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAGCTTGGTCGCTTGATCAAGGAAGAAAATCAACCTCTATCAAGTAATTTGAAGGTAGAGGAAACAGATATTCTG
ACAACTCTCAGTCGCCTGTCTGGTATTCCAGTCCAAAAATTGACTCAGACAGATGCTAAAAAATATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGCCAAGATGAAGCTATATCAGCTATTAGTCGCGCAATTCGTCGTAATCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTACCTTTATGTTCTTGGGTCCAACTGGGGTTGGTAAGACCGAGTTGGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCTAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACAGACCTT
ATTCTGTTCTCTTATTTGACGAAGTTGAAAAAGCCCATCCGGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTGACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGCAATCTAGGAGCAACCAG
TTTGCGTGATGATAAGACAGTCGGCTTTGGGGCTCGCGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCAGCAGAC
CATATGCAGGAGGTTGTCAAAGTGATGGTTAAACCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAATTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGATATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGTGATTTACAAGCTGGTCAGACCTTGAAAGTGGGGGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAGGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCAATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
CATCTTATACGCTATCATCAGCGACAGAGGAACCCTAGCAACTCGTATTTTAGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGGAGAAACCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGATCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTTTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCGCACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTGGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAACGTATGAACAATATCATTGACGATA
TTGAGAAAGATGGTAAGGTCATCCTCTTTATCGATGAGCTTCATACGATTATGGGGTCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGACGCTTCGCTAAGATCAGCATTGAAGAGCCAAGTGTGGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCAATTGAAACA
GCTGTGAAATATGCTCATCGTTACTTGACAAGCAAGCATCTGCCGGATTCAGCAATTGATCTGTTAGATGAAGCTAGTGC
TACAGTGCGTAACAATGGTCCCCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAGCTTGGTCGCTTGATCAAGGAAGAAAATCAACCTCTATCAAGTAATTTGAAGGTAGAGGAAACAGATATTCTG
ACAACTCTCAGTCGCCTGTCTGGTATTCCAGTCCAAAAATTGACTCAGACAGATGCTAAAAAATATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGCCAAGATGAAGCTATATCAGCTATTAGTCGCGCAATTCGTCGTAATCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTACCTTTATGTTCTTGGGTCCAACTGGGGTTGGTAAGACCGAGTTGGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCTAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACAGACCTT
ATTCTGTTCTCTTATTTGACGAAGTTGAAAAAGCCCATCCGGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTGACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGCAATCTAGGAGCAACCAG
TTTGCGTGATGATAAGACAGTCGGCTTTGGGGCTCGCGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCAGCAGAC
CATATGCAGGAGGTTGTCAAAGTGATGGTTAAACCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAATTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGATATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGTGATTTACAAGCTGGTCAGACCTTGAAAGTGGGGGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
78.052 |
100 |
0.782 |
| clpC | Streptococcus pneumoniae D39 |
78.052 |
100 |
0.782 |
| clpC | Streptococcus pneumoniae TIGR4 |
78.052 |
100 |
0.782 |
| clpC | Streptococcus mutans UA159 |
67.5 |
98.888 |
0.667 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.176 |
100 |
0.667 |
| clpC | Streptococcus thermophilus LMD-9 |
66.054 |
100 |
0.666 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.626 |
100 |
0.503 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.06 |
100 |
0.462 |
| clpE | Streptococcus pneumoniae Rx1 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus mutans UA159 |
47.436 |
77.132 |
0.366 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.613 |
81.459 |
0.363 |