Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   MUA75_RS04880 Genome accession   NZ_CP094795
Coordinates   995685..996671 (+) Length   328 a.a.
NCBI ID   WP_262630119.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6164     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 990685..1001671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA75_RS04865 (MUA75_04855) - 991127..992068 (+) 942 WP_000786743.1 ABC transporter ATP-binding protein -
  MUA75_RS04870 (MUA75_04860) - 992087..993742 (+) 1656 WP_000197090.1 peptide ABC transporter substrate-binding protein -
  MUA75_RS04875 (MUA75_04865) opp4A 993954..995634 (+) 1681 Protein_954 oligopeptide ABC transporter substrate-binding protein -
  MUA75_RS04880 (MUA75_04870) amiE 995685..996671 (+) 987 WP_262630119.1 ABC transporter ATP-binding protein Regulator
  MUA75_RS04885 (MUA75_04875) - 996674..997654 (+) 981 WP_000427763.1 ABC transporter ATP-binding protein -
  MUA75_RS04890 (MUA75_04880) opp4B 997647..998609 (+) 963 WP_262630121.1 oligopeptide ABC transporter permease -
  MUA75_RS04895 (MUA75_04885) opp4C 998621..999502 (+) 882 WP_001180266.1 oligopeptide ABC transporter permease -
  MUA75_RS04900 (MUA75_04890) trpS 999544..1000533 (-) 990 WP_000448935.1 tryptophan--tRNA ligase -
  MUA75_RS04905 (MUA75_04895) spxA 1000828..1001223 (+) 396 WP_000258003.1 transcriptional regulator SpxA -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37028.44 Da        Isoelectric Point: 7.8577

>NTDB_id=580190 MUA75_RS04880 WP_262630119.1 995685..996671(+) (amiE) [Staphylococcus aureus strain IVB6164]
MNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSNGEVIFDGKRIDT
LNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANTLAKDLLKKVGIARQDEILNSYPHQLSGG
MRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGG
IKEILHNPKYPYTQKLLSTIPKLKEEQKRLETIEGIVPSIQAFYVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHL
YQNEYKEI

Nucleotide


Download         Length: 987 bp        

>NTDB_id=580190 MUA75_RS04880 WP_262630119.1 995685..996671(+) (amiE) [Staphylococcus aureus strain IVB6164]
ATGAATAATGTATTGTTAGAGGTTAAAGATTTAGAAACCTCATTAAAAATAAATAATGAATGGTTAGCAACTGTTGAAAA
TATTTCTTTTGAATTATCTAAAGGAGAAGTTTTGGGTATAGTAGGGGAATCTGGTTGTGGTAAGTCCATATTAAGTAAGT
CAATTATTAAATTATTACCAGAAAAGATATCTAAACTAAGTAATGGAGAAGTTATATTTGATGGTAAACGAATCGATACG
CTCAATGAGAAGCAATTGCTAGATATTCGAGGAAATGATATTGCTATGATTTTTCAAGAACCTATGACTGCTTTAAATCC
GGTATTTACCATAAAAAATCAACTAGTGGAATCTATAAAATCACATAAAAAAATTTCTAAAAAAGAAGCAAATACCTTAG
CAAAAGATTTACTAAAAAAAGTTGGAATTGCAAGACAAGATGAAATATTAAATAGCTATCCTCATCAATTATCTGGTGGT
ATGAGGCAAAGAGTAATGATTGCAATGGCCATTTCATGTTCTCCCAAATTATTAATTGCTGATGAACCTACAACTGCTTT
GGATGTCACGATCCAAGCGCAAATATTAGACTTATTAAAAGAATTGCAAAAGGAAACGCAAATGGCAATTATGATGATTA
CACATGATTTGAGTGTGGTTGCTGAATTTTGCGATAAAGTTTTGGTTATGTATGCAGGTCAAATTGTAGAATTTGGAGGC
ATAAAAGAAATACTACACAATCCGAAATATCCTTATACCCAAAAATTATTATCTACAATTCCAAAACTTAAAGAAGAGCA
GAAACGACTTGAAACGATAGAAGGAATTGTGCCATCAATTCAAGCATTTTACGTAAATAAGTGCAGATTTGCAAATAGAT
GTAACAAAAAACTGGATATTTGTAATAATCAATCTCCTAAAATGCATGTTTGTGAAGACGTCATTGTACGTTGTCATTTG
TACCAAAATGAATATAAGGAGATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

42.073

100

0.421

  amiE Streptococcus thermophilus LMD-9

42.073

100

0.421

  amiE Streptococcus salivarius strain HSISS4

42.073

100

0.421

  oppD Streptococcus mutans UA159

44.66

94.207

0.421