Detailed information NTG0580162

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6L29_RS07485
• Genome accession: NZ_CP077238
• Coordinates: 1594882..1595637 (-)
• Length: 251 a.a.
• NCBI ID: WP_005069530.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain FDAARGOS 1399
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1589882..1600637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L29_RS07455 (I6L29_07455)	-	1590190..1590630 (-)	441	WP_002121449.1	SRPBCC family protein	-
I6L29_RS07460 (I6L29_07460)	tadA	1590701..1591204 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
I6L29_RS07465 (I6L29_07465)	hibch	1591210..1592334 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
I6L29_RS07470 (I6L29_07470)	ung	1592331..1593044 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
I6L29_RS07475 (I6L29_07475)	-	1593098..1593694 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
I6L29_RS07480 (I6L29_07480)	gspK	1593922..1594881 (-)	960	WP_005076277.1	type II secretion system minor pseudopilin GspK	-
I6L29_RS07485 (I6L29_07485)	xcpW	1594882..1595637 (-)	756	WP_005069530.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6L29_RS07490 (I6L29_07490)	xcpV	1595637..1596017 (-)	381	WP_005069533.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6L29_RS07495 (I6L29_07495)	-	1596007..1596561 (-)	555	WP_005069534.1	type II secretion system protein	-
I6L29_RS07500 (I6L29_07500)	-	1596568..1597176 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
I6L29_RS07505 (I6L29_07505)	ycfH	1597213..1597986 (-)	774	WP_005069538.1	TatD family hydrolase	-
I6L29_RS07510 (I6L29_07510)	pilZ	1598004..1598345 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
I6L29_RS07515 (I6L29_07515)	holB	1598356..1599336 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
I6L29_RS07520 (I6L29_07520)	kdsB	1599350..1600111 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28682.93 Da
• Isoelectric Point: 9.5669

>NTDB_id=580162 I6L29_RS07485 WP_005069530.1 1594882..1595637(-) (xcpW) [Acinetobacter pittii strain FDAARGOS 1399]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=580162 I6L29_RS07485 WP_005069530.1 1594882..1595637(-) (xcpW) [Acinetobacter pittii strain FDAARGOS 1399]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80.4	99.602	0.801