Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | SPN034156_RS04195 | Genome accession | NC_021006 |
| Coordinates | 775906..776301 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae SPN034156 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 770906..781301
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPN034156_RS04170 | - | 771251..771589 (-) | 339 | WP_001809290.1 | helix-turn-helix transcriptional regulator | - |
| SPN034156_RS04175 (SPN034156_07500) | - | 771602..772375 (-) | 774 | WP_000566048.1 | class I SAM-dependent methyltransferase | - |
| SPN034156_RS11265 | - | 772821..773576 (-) | 756 | Protein_777 | epoxyqueuosine reductase QueH | - |
| SPN034156_RS04185 (SPN034156_07540) | groL | 773714..775336 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| SPN034156_RS04190 (SPN034156_07550) | groES | 775352..775636 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| SPN034156_RS04195 (SPN034156_07560) | ssbB/cilA | 775906..776301 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| SPN034156_RS04200 (SPN034156_07570) | - | 776378..777139 (-) | 762 | WP_001107771.1 | SDR family oxidoreductase | - |
| SPN034156_RS04205 (SPN034156_07580) | ytpR | 777172..777798 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| SPN034156_RS04210 (SPN034156_07590) | - | 777814..778131 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| SPN034156_RS04215 (SPN034156_07600) | - | 778128..778427 (-) | 300 | WP_001013972.1 | DUF4651 domain-containing protein | - |
| SPN034156_RS12735 | - | 778625..778705 (-) | 81 | WP_223200442.1 | hypothetical protein | - |
| SPN034156_RS04220 (SPN034156_07610) | - | 778712..778903 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| SPN034156_RS04225 (SPN034156_07620) | - | 779064..779738 (-) | 675 | WP_000725739.1 | membrane protein | - |
| SPN034156_RS04230 (SPN034156_07630) | - | 779744..780190 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| SPN034156_RS04235 (SPN034156_07640) | - | 780304..780807 (-) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| SPN034156_RS04240 (SPN034156_07650) | - | 780804..781166 (-) | 363 | WP_000078806.1 | DUF2200 family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=58014 SPN034156_RS04195 WP_000282467.1 775906..776301(-) (ssbB/cilA) [Streptococcus pneumoniae SPN034156]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=58014 SPN034156_RS04195 WP_000282467.1 775906..776301(-) (ssbB/cilA) [Streptococcus pneumoniae SPN034156]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |