Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   I6L27_RS13075 Genome accession   NZ_CP077232
Coordinates   2770178..2772406 (+) Length   742 a.a.
NCBI ID   WP_216967397.1    Uniprot ID   -
Organism   Acinetobacter pittii strain FDAARGOS 1397     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2765178..2777406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L27_RS13050 (I6L27_13055) lnt 2765698..2767257 (+) 1560 WP_216967396.1 apolipoprotein N-acyltransferase -
  I6L27_RS13055 (I6L27_13060) csaA 2767259..2767597 (-) 339 WP_016144199.1 tRNA-binding protein -
  I6L27_RS13060 (I6L27_13065) - 2767742..2768086 (-) 345 WP_016144198.1 hypothetical protein -
  I6L27_RS13065 (I6L27_13070) gspG 2768354..2768803 (-) 450 WP_227513998.1 type II secretion system major pseudopilin GspG -
  I6L27_RS13070 (I6L27_13075) gspF 2768824..2770029 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  I6L27_RS13075 (I6L27_13080) priA 2770178..2772406 (+) 2229 WP_216967397.1 primosomal protein N' Machinery gene
  I6L27_RS13080 (I6L27_13085) kefB 2772483..2774327 (+) 1845 WP_216967398.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  I6L27_RS13085 (I6L27_13090) hslO 2774491..2775366 (+) 876 WP_216967399.1 Hsp33 family molecular chaperone HslO -
  I6L27_RS13090 (I6L27_13095) - 2775504..2776115 (+) 612 WP_057104864.1 LysE family translocator -
  I6L27_RS13095 (I6L27_13100) cbpA 2776262..2777218 (+) 957 WP_216967400.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84058.79 Da        Isoelectric Point: 8.5636

>NTDB_id=580073 I6L27_RS13075 WP_216967397.1 2770178..2772406(+) (priA) [Acinetobacter pittii strain FDAARGOS 1397]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERARVGSRVAISFGRQNLIGIITEKVNPNESFTGTFQLKAISELL
DDEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVETLLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPAPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVLLGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKVVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPEHEVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEQDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQVAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=580073 I6L27_RS13075 WP_216967397.1 2770178..2772406(+) (priA) [Acinetobacter pittii strain FDAARGOS 1397]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCCCGCGTAGGTTCACGCGTCGCTATTTCATTTGGACGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTGAACCCAAATGAATCATTTACAGGCACCTTTCAACTTAAAGCCATTTCTGAACTTTTA
GATGATGAGCCTATTTTAGACGAACAAGTTTTAAGTTTATTGACATGGTCAGCCCAGTATTACCAATTTCCAATTGGTGA
GGTCATGCAAACCGCCCTACCTGCATTATTACGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATTACAC
CATGTGATAATGTTGAAACACTTCTTAAACGCTCGGTAAAGCAACAAGATGCTTATCAGATTTTAAAATTACACCCTGCT
GGAACTACAGAGAACATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTAAAAGCACTTCAAAAAAAAGGACTAGTTGA
CTGTACGCTTGAACCACACGACTTTAGCCCAGCACCTGTTCAATTGGCACAAATGCCGCTCACACTCAATGAAGACCAAA
AGAAAGCAACTCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCAGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCGCGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCTA
AACGTTTACAAGCATGGCAACAGGCTCAGACTGGCAAAGCATCTATTATTTTAGGAACACGCTCAGCCATCTATACGCCA
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAACATGACTTGTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCACTGTACCGTGGGCACTTGCAAAACTGCCCTGTTCTTTTAGGTTCAGCAACACCGAGCATCGATAGTT
ATTATTTGGTCGAAACTGGCAAATTAACTTCACTGCAACTTAACCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAGTTGTCAAAAAACAACATGGTATTAGCCAACCTTTAATTGAACAAATTAAAAACACCTTAGCCAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTGTGTGAAAGCTGTGGCTGGCAAGCAA
ATTGTCCGCATTGTGATGCACATTTTACTTTGCATACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGCACTGTT
CATCGCTTGCCCGATCACTGCCCTGAATGTCAGCAAAAAAGCCTAAAAACCTTGGGTGCTGGAACAGCTAAGGTTGAAGA
GCACTTACAAGAATTATTTCCCGAACATGAGGTGATTCGGGTTGACCGTGACAGCACGAGTCGTGTCGGAAGCTGGCAAA
AAATCTATGATCGTATTCACCAAAACAAACCAACAATTTTGCTCGGCACTCAAATGTTGGCAAAAGGCCATCATTTTCCA
CACGTCACCTTAGTTGCTATTTTAGATATTGATGCGGGCTTACTGAGTGTCGATATTCGTGCGCCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCGGGACGTGCAGGCCGTGGCGAACATAAAGGCCATGTTTACCTACAAACCCTAAGACCAGATC
ACCCTTTACTCACCACACTCATCGAACAAGATTATCGGGCGGTTGCCAAACAGACACTTGCAGAACGTAAAGTCGCATTG
CTGCCGCCTTATCGCTATGCCGTACTGATACGTGCAGAGTCGAAAGACCGTGACTATACCTTACATTTTTTAAATGAAGC
TGCCGAGCAACTTCGTCAAGTGGCTGGTGAAATTGTTGATATTTGGGGACCTATTCCAGCCCCTATGGAACGTAAAGCGG
GACGCTACCGCGCACATATGGTGATTTTATCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCACAA
TTAGTTCATGCGCCGCGCCAGCATCAACTCAGGCTATCAATTGATGTCGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

96.9

100

0.969