Detailed information NTG0580060

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6L27_RS06570
• Genome accession: NZ_CP077232
• Coordinates: 1378829..1379644 (-)
• Length: 271 a.a.
• NCBI ID: WP_216968740.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain FDAARGOS 1397
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1373829..1384644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L27_RS06540 (I6L27_06545)	-	1374135..1374575 (-)	441	WP_062848583.1	SRPBCC family protein	-
I6L27_RS06545 (I6L27_06550)	tadA	1374646..1375149 (-)	504	WP_216968734.1	tRNA adenosine(34) deaminase TadA	-
I6L27_RS06550 (I6L27_06555)	hibch	1375156..1376280 (-)	1125	WP_216968736.1	enoyl-CoA hydratase/isomerase family protein	-
I6L27_RS06555 (I6L27_06560)	ung	1376277..1376990 (-)	714	WP_016145102.1	uracil-DNA glycosylase	-
I6L27_RS06560 (I6L27_06565)	-	1377044..1377640 (-)	597	WP_016145101.1	6-pyruvoyl trahydropterin synthase family protein	-
I6L27_RS06565 (I6L27_06570)	gspK	1377869..1378828 (-)	960	WP_216968738.1	type II secretion system minor pseudopilin GspK	-
I6L27_RS06570 (I6L27_06575)	xcpW	1378829..1379644 (-)	816	WP_216968740.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6L27_RS06575 (I6L27_06580)	xcpV	1379644..1380024 (-)	381	WP_017482272.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6L27_RS06580 (I6L27_06585)	-	1380014..1380568 (-)	555	WP_216968742.1	type II secretion system protein	-
I6L27_RS06585 (I6L27_06590)	-	1380575..1381183 (-)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
I6L27_RS06590 (I6L27_06595)	ycfH	1381220..1381993 (-)	774	WP_216968744.1	TatD family hydrolase	-
I6L27_RS06595 (I6L27_06600)	pilZ	1382011..1382352 (-)	342	WP_216968746.1	PilZ domain-containing protein	-
I6L27_RS06600 (I6L27_06605)	holB	1382363..1383343 (-)	981	WP_163119588.1	DNA polymerase III subunit delta'	-
I6L27_RS06605 (I6L27_06610)	kdsB	1383357..1384118 (-)	762	WP_062848588.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30897.36 Da
• Isoelectric Point: 9.9694

>NTDB_id=580060 I6L27_RS06570 WP_216968740.1 1378829..1379644(-) (xcpW) [Acinetobacter pittii strain FDAARGOS 1397]
MIKNKSFRSPSLASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQLQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=580060 I6L27_RS06570 WP_216968740.1 1378829..1379644(-) (xcpW) [Acinetobacter pittii strain FDAARGOS 1397]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTTAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGAGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAACTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAACATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.444	83.026	0.734