Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6L84_RS06925 Genome accession   NZ_CP077224
Coordinates   1407818..1409584 (-) Length   588 a.a.
NCBI ID   WP_060553936.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1454     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402818..1414584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L84_RS06910 (I6L84_06910) - 1402911..1404524 (-) 1614 WP_060553899.1 CTP synthase -
  I6L84_RS06915 (I6L84_06915) manA 1404967..1405911 (-) 945 WP_060553898.1 mannose-6-phosphate isomerase, class I -
  I6L84_RS06920 (I6L84_06920) rcrQ 1406071..1407828 (-) 1758 WP_060553897.1 ABC transporter ATP-binding protein Regulator
  I6L84_RS06925 (I6L84_06925) rcrP 1407818..1409584 (-) 1767 WP_060553936.1 ABC transporter ATP-binding protein Regulator
  I6L84_RS06930 (I6L84_06930) - 1409577..1410035 (-) 459 WP_012130789.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6L84_RS06935 (I6L84_06935) - 1410308..1410877 (-) 570 WP_060553896.1 hypothetical protein -
  I6L84_RS06940 (I6L84_06940) - 1410887..1411297 (-) 411 WP_060553895.1 peptide deformylase -
  I6L84_RS06945 (I6L84_06945) scrK 1411346..1412245 (-) 900 WP_045504231.1 fructokinase ScrK -
  I6L84_RS06950 (I6L84_06950) - 1412486..1413010 (-) 525 WP_060954889.1 hypothetical protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 64988.30 Da        Isoelectric Point: 5.4568

>NTDB_id=580031 I6L84_RS06925 WP_060553936.1 1407818..1409584(-) (rcrP) [Streptococcus gordonii strain FDAARGOS 1454]
MFKLFKRLTSKEIGLILMTVVFICLTVYLELEVPTYMSEITTLLQTPGTTTGDLWVPGLKMLGLSFASLFSLVIAGFVSS
RMASSYTTRLREDIFNRVLDYSNSEIKKFSIPSLLTRTTNDITQIQVFIAMGLQVVIRGSIMAIWAMTKVVGKSDAWLIA
VLVAVAAIILMTIVLVTLAFPKQSIVQTLTDKLNSVTRESLTGIRVVRAYNAEDYQDAKFGAANDEVTSLNIFINRFMSL
FNPIMSGISSGLTLAIYWIGAYLIHSAASADKLGLFSDMVVFMSYGMQVVIGFLLMGALFIVLPRTLVSAGRINKVLALD
SSIKEKDQAKTEGQSKGQVTFEDVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLVNLIPRFYDVSEGRILVD
GIDVRDYELKALRNKVGYIPQKAVLFSGTIASNLDFGESMETPLDEEKMWEALELAQAKSFVEEKEAELESEVSQGGTNY
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAEQTQHMTKLIVAQRISTIMDADQILVLDNGKVVGQGT
HKELLTTNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=580031 I6L84_RS06925 WP_060553936.1 1407818..1409584(-) (rcrP) [Streptococcus gordonii strain FDAARGOS 1454]
ATGTTTAAATTATTTAAACGCTTGACGTCAAAAGAAATCGGCCTGATTTTGATGACAGTTGTTTTTATCTGTCTGACCGT
TTATCTAGAGTTGGAAGTGCCAACTTATATGTCGGAAATTACAACCTTACTACAGACACCGGGGACAACGACAGGAGATC
TATGGGTGCCAGGTTTGAAAATGCTAGGCCTATCCTTTGCCAGCTTATTCTCCTTGGTAATAGCTGGTTTTGTGTCCTCT
CGGATGGCTTCTAGCTATACTACCCGCTTGCGTGAGGATATTTTTAATCGTGTCTTGGATTATTCTAATTCAGAGATTAA
AAAATTCTCTATCCCAAGTCTTCTGACCAGAACAACCAACGATATTACCCAAATTCAGGTGTTTATCGCTATGGGACTAC
AAGTTGTTATTCGAGGAAGCATCATGGCGATTTGGGCTATGACGAAGGTTGTTGGCAAATCAGATGCTTGGTTGATCGCT
GTTTTAGTTGCGGTTGCGGCCATTATATTAATGACGATTGTCTTAGTGACTTTGGCTTTTCCAAAGCAATCTATTGTACA
AACCTTGACAGATAAATTAAATAGTGTGACACGTGAGAGTTTGACAGGGATTCGGGTTGTTCGGGCCTATAATGCAGAAG
ATTACCAGGATGCAAAATTTGGTGCAGCAAACGACGAGGTAACTAGCCTTAATATTTTTATTAACCGCTTCATGTCTTTG
TTCAATCCGATTATGAGCGGAATTTCAAGTGGTTTAACGCTGGCTATTTATTGGATTGGAGCTTATTTGATTCATAGCGC
AGCATCTGCTGATAAGCTTGGTCTATTCAGTGATATGGTTGTTTTCATGTCTTATGGTATGCAGGTTGTAATTGGCTTCT
TGCTGATGGGGGCTTTATTTATTGTTTTACCACGTACCCTTGTTTCGGCAGGACGGATTAACAAAGTGTTAGCACTGGAT
AGCAGTATCAAAGAAAAAGATCAAGCAAAGACTGAAGGCCAAAGCAAAGGTCAAGTAACTTTTGAAGATGTTTCTTTCCG
TTATGCCAAAAATTCTGAGGCAGTCATTGAGCATGTTAGCTTTACGGCTAAAGCTGGTGAAACAGTTGCCTTTATTGGAT
CTACTGGTTCAGGTAAATCAACCCTTGTCAATTTGATACCTCGTTTCTATGATGTGTCAGAAGGTAGGATTCTAGTCGAT
GGTATAGATGTCCGTGACTACGAGCTTAAAGCTCTACGTAATAAGGTAGGATATATTCCGCAGAAAGCTGTACTTTTCTC
AGGAACAATTGCTTCAAATTTGGACTTTGGAGAAAGCATGGAAACTCCACTAGATGAAGAGAAAATGTGGGAAGCCCTTG
AACTAGCACAAGCCAAATCATTTGTAGAAGAAAAAGAGGCAGAGCTTGAGTCTGAAGTGTCTCAAGGAGGCACCAACTAT
TCTGGTGGTCAACGCCAACGTCTGGCTATTGCGCGTGCATTGGCCCGTAAGCCGGAAATTTTAATATTTGATGATTCTTT
CTCTGCTTTGGACTATAAGACAGATCGTATTTTACGAAAAGAATTGGCAGAACAGACCCAACATATGACAAAGCTGATTG
TCGCTCAACGAATCTCCACTATTATGGATGCCGATCAAATCCTAGTTCTAGACAATGGTAAAGTCGTTGGACAAGGTACC
CATAAAGAGTTGTTGACTACGAATGAAGTGTACCAAGAAATTGCTTATTCTCAATTATCAAAGGAGGAACTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-285)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

69

100

0.704