Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6L84_RS01945 Genome accession   NZ_CP077224
Coordinates   368246..369049 (+) Length   267 a.a.
NCBI ID   WP_060553991.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1454     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 363246..374049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L84_RS01925 (I6L84_01925) - 363408..364034 (+) 627 WP_196755809.1 AAA family ATPase -
  I6L84_RS01930 (I6L84_01930) thrS 364045..365988 (+) 1944 WP_060553992.1 threonine--tRNA ligase -
  I6L84_RS01935 (I6L84_01935) micA 366198..366899 (+) 702 WP_008809004.1 response regulator YycF Regulator
  I6L84_RS01940 (I6L84_01940) micB 366892..368253 (+) 1362 WP_053794800.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6L84_RS01945 (I6L84_01945) vicX 368246..369049 (+) 804 WP_060553991.1 MBL fold metallo-hydrolase Regulator
  I6L84_RS01950 (I6L84_01950) - 369084..369440 (+) 357 WP_060553990.1 YbaN family protein -
  I6L84_RS01955 (I6L84_01955) rnc 369683..370381 (+) 699 WP_045502139.1 ribonuclease III -
  I6L84_RS01960 (I6L84_01960) smc 370372..373905 (+) 3534 WP_060553989.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29760.74 Da        Isoelectric Point: 5.9444

>NTDB_id=580007 I6L84_RS01945 WP_060553991.1 368246..369049(+) (vicX) [Streptococcus gordonii strain FDAARGOS 1454]
MTKEGFKYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
VQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=580007 I6L84_RS01945 WP_060553991.1 368246..369049(+) (vicX) [Streptococcus gordonii strain FDAARGOS 1454]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCCAGTGGTAATTGTTTTTATTTAGAAACAGACAAAAA
GAAGATTTTGGTGGATGCAGGACTATCTGGTAAAAAAATCACTAGTCTTCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTTTTAGCCCGAAAATATAACTTAGAT
ATCTATGCTAACGAAGATACTTGGAAAGCTATGGATAGTGCCTTGGGAAAAATTGATATTAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGTTTTGTTATGCTGACGGATACGGGCTATGTGAGTGATCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGATACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGAGCTTACCCTTGGAGTCTTAA
GCAACGTATTTTATCCGATAAAGGGCATTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACAGAA
CCAAAAAGATTTATCTAGGTCACTTAAGTAAGGAGAATAATATCAAGGAGCTGGCTCATATGACTATGGTTAATCAGCTG
GTTCAAGCTGACTTGGCAGTCAATCATGATTTTCAAGTTTTGGATACTTCTCCTGATACGGCTACGCCTCTGACATCAAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.15

100

0.802