Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6L66_RS11095 Genome accession   NZ_CP077223
Coordinates   2353601..2354227 (+) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter ludwigii strain FDAARGOS 1436     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2348601..2359227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L66_RS11075 (I6L66_11060) - 2348994..2350754 (-) 1761 WP_040017074.1 AAA family ATPase -
  I6L66_RS11080 (I6L66_11065) matP 2350941..2351393 (+) 453 WP_014169429.1 macrodomain Ter protein MatP -
  I6L66_RS11085 (I6L66_11070) ompA 2351463..2352518 (-) 1056 WP_020884794.1 porin OmpA -
  I6L66_RS11090 (I6L66_11075) sulA 2352874..2353383 (-) 510 WP_032677816.1 SOS-induced cell division inhibitor SulA -
  I6L66_RS11095 (I6L66_11080) sxy/tfoX 2353601..2354227 (+) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  I6L66_RS11100 (I6L66_11085) yccS 2354184..2356346 (-) 2163 WP_020884791.1 YccS family putative transporter -
  I6L66_RS11105 (I6L66_11090) - 2356366..2356812 (-) 447 WP_025204535.1 YccF domain-containing protein -
  I6L66_RS11110 (I6L66_11095) helD 2356936..2358990 (+) 2055 WP_040017075.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=579976 I6L66_RS11095 WP_020884792.1 2353601..2354227(+) (sxy/tfoX) [Enterobacter ludwigii strain FDAARGOS 1436]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=579976 I6L66_RS11095 WP_020884792.1 2353601..2354227(+) (sxy/tfoX) [Enterobacter ludwigii strain FDAARGOS 1436]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTCGGGGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGACGGGGAGCTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCATCATTCTTAACCCTGATGAAACGGGGTCGCCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGGCTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGTGCCCGTGCGAGCTGGCTAAAGATGCGGGCGAAAAAT
AAAGCGCTTAGCATTAAAGTGCTCTTCGCACTGGAAGGGGCCATCGCCGGACTTCATGAGGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577