Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SPYKS030_RS06480 Genome accession   NZ_AP018337
Coordinates   1192132..1192608 (-) Length   158 a.a.
NCBI ID   WP_032461567.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain KS030     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1187132..1197608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYKS030_RS06465 (SPYKS030_12160) fbp54 1187945..1189597 (+) 1653 WP_011054400.1 Rqc2 family fibronectin-binding protein Fbp54 -
  SPYKS030_RS06470 (SPYKS030_12170) - 1189656..1190903 (-) 1248 WP_011054399.1 tetratricopeptide repeat protein -
  SPYKS030_RS06475 (SPYKS030_12180) - 1190893..1192074 (-) 1182 WP_002990002.1 AI-2E family transporter -
  SPYKS030_RS06480 (SPYKS030_12190) mutX 1192132..1192608 (-) 477 WP_032461567.1 NUDIX hydrolase Machinery gene
  SPYKS030_RS06485 (SPYKS030_12200) rfbB 1192829..1193869 (-) 1041 WP_002984881.1 dTDP-glucose 4,6-dehydratase -
  SPYKS030_RS06490 (SPYKS030_12210) - 1194113..1194706 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  SPYKS030_RS06495 (SPYKS030_12220) rfbA 1194706..1195575 (-) 870 WP_010922195.1 glucose-1-phosphate thymidylyltransferase RfbA -
  SPYKS030_RS06500 (SPYKS030_12230) - 1195633..1196739 (-) 1107 WP_011054398.1 NAD(P)/FAD-dependent oxidoreductase -
  SPYKS030_RS06505 (SPYKS030_12240) - 1196779..1197567 (-) 789 WP_002984887.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18409.63 Da        Isoelectric Point: 4.2635

>NTDB_id=57983 SPYKS030_RS06480 WP_032461567.1 1192132..1192608(-) (mutX) [Streptococcus pyogenes strain KS030]
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDCPFFSAKFTYDQNNQLMDKSVTFY

Nucleotide


Download         Length: 477 bp        

>NTDB_id=57983 SPYKS030_RS06480 WP_032461567.1 1192132..1192608(-) (mutX) [Streptococcus pyogenes strain KS030]
ATGACTCAATTAGCAACCATTTGTTACATTGATAATGGCGATTCTTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACAAAGGCAAGTGGATTTCAGTTGGGGGTAAGCTCGAGGCTGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTTTAGAGGAAACCCATTTGACTGTTACAGAGATGGCCTTTAAAGGAATCATTACTTTTCCAGAATTTACCCCTGGTCAT
GACTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAAGAGTCACGAGAAGGAACCTT
GGAATGGGTACCTTACGATCAAGTGTTGGAAAAGCCAACTTGGGAAGGTGATTATGACATTTTTAAATGGATTTTAGAAG
ACTGTCCTTTTTTCTCTGCCAAATTTACCTATGACCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.253

100

0.703

Multiple sequence alignment