Detailed information NTG0579797

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6L28_RS12930
• Genome accession: NZ_CP077205
• Coordinates: 2761252..2761950 (-)
• Length: 232 a.a.
• NCBI ID: WP_216946204.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain FDAARGOS 1398
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2756252..2766950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L28_RS12900 (I6L28_12900)	-	2756559..2756999 (-)	441	WP_061875521.1	SRPBCC family protein	-
I6L28_RS12905 (I6L28_12905)	tadA	2757070..2757573 (-)	504	WP_057106324.1	tRNA adenosine(34) deaminase TadA	-
I6L28_RS12910 (I6L28_12910)	hibch	2757580..2758704 (-)	1125	WP_216946202.1	enoyl-CoA hydratase/isomerase family protein	-
I6L28_RS12915 (I6L28_12915)	ung	2758701..2759414 (-)	714	WP_016145102.1	uracil-DNA glycosylase	-
I6L28_RS12920 (I6L28_12920)	-	2759468..2760064 (-)	597	WP_174729142.1	6-pyruvoyl trahydropterin synthase family protein	-
I6L28_RS12925 (I6L28_12925)	gspK	2760293..2761252 (-)	960	WP_216946203.1	type II secretion system minor pseudopilin GspK	-
I6L28_RS12930 (I6L28_12930)	xcpW	2761252..2761950 (-)	699	WP_216946204.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6L28_RS12935 (I6L28_12935)	xcpV	2761950..2762330 (-)	381	WP_031948175.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6L28_RS12940 (I6L28_12940)	-	2762320..2762874 (-)	555	WP_057106321.1	type II secretion system protein	-
I6L28_RS12945 (I6L28_12945)	-	2762881..2763489 (-)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
I6L28_RS12950 (I6L28_12950)	ycfH	2763526..2764299 (-)	774	WP_216946205.1	TatD family hydrolase	-
I6L28_RS12955 (I6L28_12955)	pilZ	2764317..2764658 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
I6L28_RS12960 (I6L28_12960)	holB	2764669..2765649 (-)	981	WP_216946206.1	DNA polymerase III subunit delta'	-
I6L28_RS12965 (I6L28_12965)	kdsB	2765663..2766424 (-)	762	WP_216946207.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 232 a.a.
• Molecular weight: 26455.33 Da
• Isoelectric Point: 9.5995

>NTDB_id=579797 I6L28_RS12930 WP_216946204.1 2761252..2761950(-) (xcpW) [Acinetobacter pittii strain FDAARGOS 1398]
MINNKYSFRRETSSLAARSSSARLIRASGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRDRNAQHEVKLFELQDAYQQV
LRDSLQIIPLSANQGGQLHPALELDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSS
TLLSQVEQFEVIVLTPQEVTRWPEINLDPTKPEEFRKLPKGVKIQLTVAGVSYEWIYSVNQGNLSLSKEGGV

Nucleotide

• Length: 699 bp

>NTDB_id=579797 I6L28_RS12930 WP_216946204.1 2761252..2761950(-) (xcpW) [Acinetobacter pittii strain FDAARGOS 1398]
ATGATAAACAATAAATATAGCTTCCGAAGAGAAACTTCAAGTCTTGCGGCACGATCGAGCAGTGCTCGATTAATTCGTGC
CTCAGGATTTACTTTAGTTGAGCTTTTAGTTGCAATTGCAATTTTTGCCATTTTATCTTTGTTGGGGTGGAAGGTTTTTG
ATTATTTATTAAAGGTCCGAGATCGTAATGCTCAACATGAAGTAAAGTTATTTGAATTACAAGATGCTTATCAGCAAGTT
TTACGGGATTCATTGCAAATTATACCGTTATCGGCCAATCAAGGCGGACAGTTACATCCAGCTCTAGAGCTTGATAACCA
AGTTCTTCGTTTTAGTAAAGCTGGTGTTACTGATCCCTTAAAGCAAGGATTATCCCCTTTTGAGCGTATTGAATATCGAT
ATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGTAATTTAAATACTTCAAACAGAGAGCAGCCTTTATCAAGT
ACGCTGTTGAGCCAAGTTGAACAATTTGAAGTTATAGTGTTGACACCGCAAGAAGTGACAAGATGGCCAGAGATTAATCT
TGATCCCACAAAACCTGAAGAGTTTAGAAAGTTACCGAAAGGAGTAAAAATACAACTCACCGTTGCAGGAGTAAGTTATG
AGTGGATTTATAGCGTAAATCAAGGGAATTTATCTCTCTCCAAAGAAGGAGGGGTATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (82-211)

• Prokaryotic N-terminal methylation motif (N_methyl) (26-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	84.483	100	0.845