Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   I6L28_RS06525 Genome accession   NZ_CP077205
Coordinates   1347321..1351805 (+) Length   1494 a.a.
NCBI ID   WP_216947111.1    Uniprot ID   -
Organism   Acinetobacter pittii strain FDAARGOS 1398     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1342321..1356805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L28_RS06500 (I6L28_06500) - 1342765..1343403 (-) 639 WP_216947109.1 hypothetical protein -
  I6L28_RS06505 (I6L28_06505) pilG 1343688..1344071 (+) 384 WP_042897425.1 twitching motility response regulator PilG Regulator
  I6L28_RS06510 (I6L28_06510) pilH 1344094..1344456 (+) 363 WP_002116220.1 response regulator -
  I6L28_RS06515 (I6L28_06515) pilI 1344517..1345053 (+) 537 WP_216947110.1 chemotaxis protein CheW -
  I6L28_RS06520 (I6L28_06520) pilJ 1345096..1347174 (+) 2079 WP_061874138.1 methyl-accepting chemotaxis protein -
  I6L28_RS06525 (I6L28_06525) chpA 1347321..1351805 (+) 4485 WP_216947111.1 Hpt domain-containing protein Regulator
  I6L28_RS06530 (I6L28_06530) - 1351805..1352272 (+) 468 WP_031949217.1 hypothetical protein -
  I6L28_RS06535 (I6L28_06535) - 1352475..1353866 (+) 1392 WP_216947112.1 coproporphyrinogen-III oxidase family protein -
  I6L28_RS06540 (I6L28_06540) - 1353875..1354756 (+) 882 WP_016143399.1 alpha/beta fold hydrolase -
  I6L28_RS06545 (I6L28_06545) dapE 1354895..1356031 (-) 1137 WP_216947113.1 succinyl-diaminopimelate desuccinylase -
  I6L28_RS06550 (I6L28_06550) - 1356157..1356300 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1494 a.a.        Molecular weight: 170709.19 Da        Isoelectric Point: 4.4382

>NTDB_id=579793 I6L28_RS06525 WP_216947111.1 1347321..1351805(+) (chpA) [Acinetobacter pittii strain FDAARGOS 1398]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIDEWMQSENIAKLIEIRRYFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKDHTLDFRPLILLGQQLQQQKSLEPALDELLLLS
DILTAETQTGLETHDLEPETAKVLTISTPEVAIENEQTLAETLILFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRDYREFIRNSLDLLAAHCSTEQLESDLQKFNQIWDVYM
EQHGEHSNPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMVGLYEYTNQLKESY
DILLERPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLEELKLYTQHIPILNIEPTFNTEVEQTTNKPL
IENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNIWVKDQENFAALNNLMRYLHTLKGG
ANMIQATYIGLIAHELESIYERLIQKQLIASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKNAAQTYDSFSS
TVKDEQTQTEAYVIPELNFEALQQEVINNTALSFSELTSGSEQIAESNNQLVEYAELRVLYADHDHTESVQDQDINSVVE
QTFMEEAAELLEMADYLLRQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLENVQAIAYQLENAFEQFALHHFSSNIYDNL
LESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSSEPVMSFVQGDGTEPPPMMGAWEHTERLDQ
NNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIENSRYTEFD
PLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRIVRQTST
ALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTFKDDGQGI
DIEKVRQKALMSGLIHSEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQGTVFTIR
VPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEVFEFENKRYPLRYLSEFVGNQPIPRLSGMMYSL
PVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRYKLLNETIY
RQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNLVRHHDLH
QDMPVIMITSRTGEKHRERAFALGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4485 bp        

>NTDB_id=579793 I6L28_RS06525 WP_216947111.1 1347321..1351805(+) (chpA) [Acinetobacter pittii strain FDAARGOS 1398]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGATGATGAATTTCT
TGAAATCTTTGTCGAAGAAATTGAGGAAATTTTTGTTGAATTACAATCTTTGATTGACGAGTGGATGCAATCTGAAAATA
TTGCTAAGCTTATCGAAATCCGCCGTTATTTTCATACATTGAAAGGTTCTGGCCGGATGATTGGTGCCAAATCATCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTGAATCGCGTAATCAATCAGAGTCTTGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTCGATGACTTCAAATCTAAAAAAGATCATACCCTAGACTTTA
GGCCCCTCATTTTATTGGGGCAACAATTACAACAACAGAAAAGTTTAGAACCCGCTTTAGACGAACTTTTATTATTATCA
GATATCCTTACTGCTGAAACTCAAACTGGTTTAGAAACACATGATTTAGAACCAGAAACAGCTAAAGTTTTAACTATATC
TACTCCAGAAGTCGCTATAGAAAATGAGCAGACCCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAACACT
TAGCGACGATTGATCAATTTTTAGAACAAGAAATACATCAGCATGAAAGTTATAATGCTTTAATACGTGCGTTACATACG
TTACGCGGCAGCTCGGCCATGGCGCATGTTGAACCAATCTTTGATGCCAGTACCAAGGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCACTCTGAAGAAATTTCATTACTCCGCGATTATCGTGAGTTTATTCGAAATAGTTTAG
ATCTATTGGCTGCACATTGTTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGATTTGGGATGTTTATATG
GAGCAGCATGGTGAGCATTCAAACCCGCTCATGCCTCCACATGGATTAGTGTCTCAGTTATTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGATTTTGAGAAGGGAATACGGACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTGTTGTTGCAACACACTCAGTCGCAAGCAATGGTTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAT
GACATATTGCTTGAACGACCTGATTTATTACAATCAGACTATGTTTTTGAAATTTATCAAAAAGCGCATCAACAATTAAT
TCAGTTATTTGATGCCTTAGCTGCGGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGAAGAGCTAAAAC
TATATACTCAACATATTCCAATTCTTAATATTGAACCAACCTTTAATACTGAAGTTGAACAAACAACGAATAAACCTCTG
ATAGAAAATGTATTCACTGATCAGGTCACAATAGGGCAGAGTGTACAACTAGATCGACAATTCATTTCGTCTGAGCATGT
AAACCGTCATTTTGATCCAGATCTATTAGATATTTTTCTTGAAGAAGCTGATGAGTTGCTTGAAGGGATGGATACAGATC
TTAATATTTGGGTTAAAGATCAAGAAAACTTTGCCGCTCTTAATAATCTGATGCGTTATTTGCATACCTTAAAAGGTGGG
GCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAATTAGAAAGTATTTATGAGCGATTAATTCAAAAACA
GTTAATAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATGACTTGGCTGACCGTCTTCAAATAGTACGTG
AACAGCATCTAGATTATGCTGCTTCTCATACTATTCAAGCGCTTAAAAATGCAGCCCAGACCTATGATTCATTTAGTTCT
ACTGTTAAAGATGAGCAAACACAAACTGAAGCATATGTTATACCTGAATTAAATTTTGAAGCACTACAGCAAGAAGTAAT
AAATAATACGGCATTAAGCTTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTGCCGAGTCTAATAATCAACTTGTTGAAT
ACGCTGAATTACGAGTTCTTTATGCTGATCACGATCATACAGAGAGTGTCCAAGATCAAGATATTAACTCTGTTGTCGAG
CAGACATTTATGGAGGAAGCGGCCGAACTATTAGAGATGGCCGATTACTTATTAAGGCAATGGTTCGAGCAGCGTACAAA
CCGTAGTATCTTGCTTCAGCTGCAAAGGGCTGTGCACAGCTTGAAAGGTGGTTCCCGTATGTTGGGACTTGAAAACGTAC
AAGCGATTGCTTATCAGCTCGAAAACGCTTTTGAACAGTTTGCGCTTCATCATTTCAGCTCAAATATCTATGACAACTTA
TTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTTCGATGGTTTACAACAAAGTCT
GGAAAATATTCAGTTCATTGAAACGGCAATTCAAATTCCTAGTAAGTTAACTAGAACGGATCTCTTTAGCTCGGAACCTG
TAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGCGCGTGGGAGCACACAGAACGGCTTGATCAA
AATAATGAGATGATTCGAGTTTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGGTGAAAACTCGATTAACCGTTC
GCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTATTCAGCGACTTGCAGATCAGT
TACGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCAAAACACGGTATTGAGAACTCGCGTTATACGGAATTTGAT
CCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAATCTCTTGCCGAGTCTGCATCGGATTTAGTAGATTT
TAAAAATACATTATCTGAAAAGATCAGAGACACCGAAGGTTTATTGGTACAGCAATCGCGTATTCAGGCTGAAATTCAAG
AAGGTCTTATGCGAACACGTTTAGTACCATTCTCTCGATTGCTACCTCGTTTACAAAGAATTGTAAGGCAGACTTCTACC
GCGTTAAATCGACCAGCAGAGCTTTTTGTTAATAATACAGAGGGCGAGCTGGACCGGACAATGCTAGAGCGTTTGGTTAC
GCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCACAACGTGAGCAAGCGCAGAAACCAG
AAACTGGACGTATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTCGTTACCTTTAAAGACGATGGACAAGGTATT
GATATCGAGAAGGTTCGTCAAAAAGCATTAATGTCTGGTTTGATTCACTCTGAACAAGTATTAGAACATCAAGATATTTT
ACAACTGATTTTCCATCCTGGTTTAAGCACTGCCGATCAAGTCACTCAGATTTCAGGTCGTGGTGTAGGACTGGATGTAG
TGCAGAGTGATATTAAGGCCTTAGGTGGCCACGTAAGTGTCGACTCTGTCTATGGGCAGGGCACTGTCTTTACCATACGT
GTTCCAACGACTGTAGCCGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATTTGCAATCCCATTGGCTCAAAT
TGATCGAATTGTGCGGGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAGAAGTCTTTGAATTTGAAAATA
AGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTAAGTGGAATGATGTATTCATTA
CCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACTGATTGGCTCGCGCGCACAGAT
TGTAGTTAAACCAATTGGACAGCAGTTCTCTAGCATTGGTGCGATTGCAGGAGCAACTATTTTAGGTGATGGTCAAGTTT
GCTTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACTCGTCGATATAAGCTGCTTAATGAAACTATCTAT
AGACAACGCGAGTCTGACGAACGACGTCTTATCATGATTGTAGATGACTCGGTAACTGTGCGTAAGGTGACGTCTCGCTT
ACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTCGATGCAATTGAACAGTTGGAAAATATTAAACCAG
ATCTCATGTTACTTGATATTGAAATGCCGCGAATGGATGGCTTTGAGGTGCTTAACCTCGTTCGACATCATGATCTACAC
CAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGCATTTGCTTTAGGTGTTAACCA
GTACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCCTTATTCATGACATTTGAAGGGGGACTTG
CCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.88

100

0.805