Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   MUA59_RS04580 Genome accession   NZ_CP094782
Coordinates   945703..946785 (+) Length   360 a.a.
NCBI ID   WP_316959642.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6172     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 940703..951785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA59_RS04560 (MUA59_04545) - 940961..941902 (+) 942 WP_262537082.1 ABC transporter ATP-binding protein -
  MUA59_RS04565 (MUA59_04550) - 941921..943576 (+) 1656 WP_262537080.1 peptide ABC transporter substrate-binding protein -
  MUA59_RS04570 (MUA59_04555) opp3b 943746..944681 (+) 936 WP_262607969.1 oligopeptide ABC transporter permease -
  MUA59_RS04575 (MUA59_04560) opp3C 944671..945690 (+) 1020 WP_262537078.1 oligopeptide ABC transporter permease -
  MUA59_RS04580 (MUA59_04565) amiE 945703..946785 (+) 1083 WP_316959642.1 ABC transporter ATP-binding protein Regulator
  MUA59_RS04585 (MUA59_04570) - 946775..947704 (+) 930 WP_262537076.1 ABC transporter ATP-binding protein -
  MUA59_RS04590 (MUA59_04575) - 947730..949352 (+) 1623 WP_262537074.1 peptide ABC transporter substrate-binding protein -
  MUA59_RS04595 (MUA59_04580) trpS 949472..950461 (-) 990 WP_103204600.1 tryptophan--tRNA ligase -
  MUA59_RS04600 (MUA59_04585) spxA 950756..951151 (+) 396 WP_000258003.1 transcriptional regulator SpxA -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40474.29 Da        Isoelectric Point: 9.3105

>NTDB_id=579653 MUA59_RS04580 WP_316959642.1 945703..946785(+) (amiE) [Staphylococcus aureus strain IVB6172]
MMKKVLEVKNLEVSFEVEDGIVNAVRGIDYCIHEGEILAIVGESGSGKSVATKAITKLFQGENGKITNGNVKFFGEDLVE
KNEKELAKIRGKDIAMIFQDPMTSLNPTMQIGKQIMESLMIHKKMNRKDAKGKAVEILDLVGIKNAELRFKDYPHQFSGR
QRQRIVIGMALACEPKLLIADEPTTALDVTMQSQIIDLMKILQKKTNTAIIFITHDLGVVANIADKVSVMYCGEIIETGK
VEELFYYPKHPYTWGLLASMPTLESNSKSKLIAIPGTPPNLLKPPIGDAFARRSAYALNVDFKYEAPWFQLSPTHFVKSW
LLDRRAPKVIPPETVKRKFKELSYNFERPLKVEGVSFNEQ

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=579653 MUA59_RS04580 WP_316959642.1 945703..946785(+) (amiE) [Staphylococcus aureus strain IVB6172]
ATGATGAAAAAAGTATTGGAAGTAAAAAATCTCGAAGTTTCTTTCGAAGTTGAAGATGGCATAGTTAATGCAGTGAGAGG
AATTGATTATTGCATACATGAGGGAGAAATACTAGCAATTGTTGGAGAATCAGGCTCAGGTAAATCAGTTGCTACTAAAG
CAATTACTAAACTGTTCCAAGGGGAAAATGGAAAAATCACGAATGGAAATGTGAAGTTTTTTGGGGAAGATTTAGTTGAA
AAAAATGAAAAAGAACTTGCTAAGATACGAGGAAAAGATATAGCCATGATATTTCAAGATCCAATGACATCACTAAACCC
TACAATGCAAATAGGTAAACAGATTATGGAATCGTTGATGATACATAAAAAAATGAATAGAAAAGATGCCAAAGGAAAAG
CCGTAGAGATTTTAGATTTAGTAGGTATAAAAAATGCTGAATTAAGATTTAAAGATTATCCACATCAATTTTCTGGTAGA
CAACGTCAAAGGATTGTAATAGGTATGGCTCTAGCATGCGAACCAAAGTTATTAATTGCTGATGAGCCAACCACTGCATT
AGATGTAACTATGCAATCGCAAATTATTGATTTAATGAAAATATTACAAAAGAAAACAAATACTGCAATTATTTTTATTA
CTCATGATTTAGGAGTCGTTGCTAACATTGCGGACAAAGTGTCAGTTATGTATTGTGGTGAAATTATTGAGACAGGAAAA
GTAGAAGAATTGTTTTATTATCCCAAACATCCATATACATGGGGGCTTCTTGCTTCAATGCCGACATTAGAGTCTAATTC
AAAGTCAAAATTGATTGCAATTCCAGGAACACCACCTAACTTGTTGAAGCCACCTATTGGTGATGCGTTTGCAAGAAGAA
GTGCATATGCGTTAAATGTTGATTTTAAATATGAAGCGCCATGGTTTCAATTATCACCTACACATTTCGTGAAATCTTGG
TTACTAGATAGAAGGGCTCCAAAAGTAATTCCGCCAGAAACAGTTAAGCGTAAATTTAAAGAACTTTCTTATAATTTTGA
GAGACCGTTAAAAGTAGAAGGAGTATCATTTAATGAACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

53.644

95.278

0.511

  amiE Streptococcus thermophilus LMD-9

53.644

95.278

0.511

  oppD Streptococcus mutans UA159

53.982

94.167

0.508

  amiE Streptococcus salivarius strain HSISS4

53.061

95.278

0.506