Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   MUA10_RS07995 Genome accession   NZ_CP094778
Coordinates   1636068..1636781 (+) Length   237 a.a.
NCBI ID   WP_250396418.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6185     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1631068..1641781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA10_RS07920 (MUA10_07915) - 1631221..1631481 (-) 261 WP_000291093.1 DUF1108 family protein -
  MUA10_RS07925 (MUA10_07920) - 1631573..1631893 (-) 321 WP_000219664.1 hypothetical protein -
  MUA10_RS07930 (MUA10_07925) - 1631894..1632061 (-) 168 WP_045178556.1 DUF1270 domain-containing protein -
  MUA10_RS07935 (MUA10_07930) - 1632045..1632182 (-) 138 WP_001568566.1 hypothetical protein -
  MUA10_RS07940 (MUA10_07935) - 1632241..1632453 (+) 213 WP_000461464.1 hypothetical protein -
  MUA10_RS07945 (MUA10_07940) - 1632472..1632546 (-) 75 Protein_1559 hypothetical protein -
  MUA10_RS07950 (MUA10_07945) - 1632559..1632822 (-) 264 WP_001124185.1 helix-turn-helix domain-containing protein -
  MUA10_RS07955 (MUA10_07950) - 1632971..1633070 (-) 100 Protein_1561 hypothetical protein -
  MUA10_RS07960 (MUA10_07955) - 1633131..1633361 (+) 231 WP_000395455.1 hypothetical protein -
  MUA10_RS07965 (MUA10_07960) - 1633528..1634277 (-) 750 WP_115305235.1 phage antirepressor KilAC domain-containing protein -
  MUA10_RS07970 (MUA10_07965) - 1634338..1634580 (+) 243 WP_000498529.1 hypothetical protein -
  MUA10_RS07975 (MUA10_07970) - 1634528..1634836 (-) 309 WP_250396417.1 hypothetical protein -
  MUA10_RS07980 (MUA10_07975) - 1634852..1635649 (-) 798 WP_224061818.1 phage antirepressor KilAC domain-containing protein -
  MUA10_RS07985 (MUA10_07980) - 1635665..1635934 (-) 270 WP_000854068.1 helix-turn-helix transcriptional regulator -
  MUA10_RS07990 (MUA10_07985) - 1635931..1636105 (-) 175 Protein_1568 transcriptional regulator -
  MUA10_RS07995 (MUA10_07990) irvR 1636068..1636781 (+) 714 WP_250396418.1 XRE family transcriptional regulator Regulator
  MUA10_RS08000 (MUA10_07995) - 1636793..1636936 (+) 144 WP_181777830.1 hypothetical protein -
  MUA10_RS08005 (MUA10_08000) - 1636933..1637118 (+) 186 WP_250396419.1 hypothetical protein -
  MUA10_RS08010 (MUA10_08005) - 1637176..1637379 (-) 204 WP_000477304.1 hypothetical protein -
  MUA10_RS08015 (MUA10_08010) - 1637407..1638288 (+) 882 WP_250396420.1 hypothetical protein -
  MUA10_RS08020 (MUA10_08015) - 1638366..1639571 (+) 1206 WP_250396421.1 site-specific integrase -
  MUA10_RS08025 (MUA10_08020) - 1639614..1641656 (-) 2043 WP_106898740.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27111.79 Da        Isoelectric Point: 5.7170

>NTDB_id=579502 MUA10_RS07995 WP_250396418.1 1636068..1636781(+) (irvR) [Staphylococcus aureus strain IVB6185]
MNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNLRSNPSHEVIQRIADVFEVGKSDIDTTYKDDNDITSI
YNKLTPPRQKNVLNYANEQLEEQNSKGDNVVDINSYKQDKTPVNVNGCVSAGVGERLHDETLFTEMVKAPVPPHDLALKV
NGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKEYRDLHFYRNESVRLVGKVIL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=579502 MUA10_RS07995 WP_250396418.1 1636068..1636781(+) (irvR) [Staphylococcus aureus strain IVB6185]
ATGAACAAAGAAAGAAATATTATTATAGCCAAAAACATTAGAAAATTTCTCAACGATTCAAATATGTCTCAAAAGAAACT
TGCTGAACTCATTAACATAAAACCATCTACTTTAAGCGATTATTTAAATTTACGTTCCAACCCCTCTCACGAAGTTATAC
AAAGGATAGCTGATGTTTTCGAGGTTGGCAAAAGCGACATAGATACTACATACAAAGACGATAACGACATCACTTCCATA
TACAACAAACTCACACCTCCCCGCCAAAAAAACGTACTTAACTATGCAAATGAACAATTGGAAGAACAGAATTCTAAAGG
AGATAACGTTGTAGATATTAATTCATATAAACAAGATAAAACTCCAGTTAATGTCAATGGATGTGTCTCCGCTGGTGTAG
GAGAACGACTACACGATGAAACGCTATTCACTGAAATGGTTAAAGCCCCTGTTCCTCCACATGATTTAGCATTAAAAGTT
AATGGCGATTCTATGGAGCCTATGTTTAAAGATGGCGAAATCATATTTGTGGAGAAAACTCATAATATAAAGAATGGTCA
AATAGGTATATTCATCATCGAAGAAGAGGCTTATGTTAAGAAAGTCTTCGTTGAGGATGACAGATTGACTTTAGTCTCAC
TGAACAAAGAATACCGCGACCTTCACTTTTATAGAAATGAAAGTGTGAGGTTAGTAGGAAAAGTAATTTTATAG

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(127-236)

Helix-turn-helix (HTH_3)

(13-63)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

32.5

100

0.384