Detailed information NTG0579377

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KSG66_RS17785
• Genome accession: NZ_CP077106
• Coordinates: 3594807..3595952 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain DW-7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3589807..3600952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KSG66_RS17765 (KSG66_17635)	-	3590704..3591132 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
KSG66_RS17770 (KSG66_17640)	-	3591286..3591798 (+)	513	Protein_3447	bacteriocin biosynthesis protein AlbG	-
KSG66_RS17775 (KSG66_17645)	-	3591805..3593181 (-)	1377	WP_032875890.1	YncE family protein	-
KSG66_RS17780 (KSG66_17650)	-	3593221..3594576 (-)	1356	WP_032875887.1	YncE family protein	-
KSG66_RS17785 (KSG66_17655)	rapF	3594807..3595952 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
KSG66_RS17790 (KSG66_17660)	-	3595936..3596055 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
KSG66_RS17795 (KSG66_17665)	speB	3596178..3597050 (-)	873	WP_032875884.1	agmatinase	-
KSG66_RS17800 (KSG66_17670)	speE	3597109..3597939 (-)	831	WP_003151052.1	spermidine synthase	-
KSG66_RS17805 (KSG66_17675)	-	3598139..3600211 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
KSG66_RS17810 (KSG66_17680)	-	3600236..3600669 (-)	434	Protein_3455	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=579377 KSG66_RS17785 WP_074534220.1 3594807..3595952(+) (rapF) [Bacillus velezensis strain DW-7]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=579377 KSG66_RS17785 WP_074534220.1 3594807..3595952(+) (rapF) [Bacillus velezensis strain DW-7]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541