Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   MUA47_RS08620 Genome accession   NZ_CP094773
Coordinates   1798857..1800131 (+) Length   424 a.a.
NCBI ID   WP_001279341.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6195     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1793857..1805131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA47_RS08600 (MUA47_08605) - 1795180..1795275 (+) 96 WP_031901344.1 hypothetical protein -
  MUA47_RS08605 (MUA47_08610) - 1795236..1796366 (-) 1131 WP_000721719.1 HAD family hydrolase -
  MUA47_RS08610 (MUA47_08615) nagE 1796473..1797940 (-) 1468 Protein_1696 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  MUA47_RS08615 (MUA47_08620) - 1798068..1798685 (-) 618 WP_000287593.1 lysophospholipid acyltransferase family protein -
  MUA47_RS08620 (MUA47_08625) htrA 1798857..1800131 (+) 1275 WP_001279341.1 S1C family serine protease Regulator
  MUA47_RS08625 (MUA47_08630) tyrS 1800225..1801487 (-) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  MUA47_RS08630 (MUA47_08635) - 1801868..1802773 (+) 906 WP_000184373.1 transglycosylase domain-containing protein -
  MUA47_RS08635 (MUA47_08640) - 1802753..1802845 (-) 93 WP_031761401.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45733.87 Da        Isoelectric Point: 9.8964

>NTDB_id=579346 MUA47_RS08620 WP_001279341.1 1798857..1800131(+) (htrA) [Staphylococcus aureus strain IVB6195]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=579346 MUA47_RS08620 WP_001279341.1 1798857..1800131(+) (htrA) [Staphylococcus aureus strain IVB6195]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTGCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTAATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGAGTAGGTTCAGGTGTCATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAACTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAGGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACTAAAGGCATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGTGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATTGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGACCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAGCCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGACAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368