Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SPYKS030_RS00680 | Genome accession | NZ_AP018337 |
| Coordinates | 104839..105123 (+) | Length | 94 a.a. |
| NCBI ID | WP_002987779.1 | Uniprot ID | A0A0H2USY2 |
| Organism | Streptococcus pyogenes strain KS030 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 99839..110123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPYKS030_RS00655 (SPYKS030_00800) | - | 101785..102150 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| SPYKS030_RS00660 (SPYKS030_00810) | comGA | 102243..103181 (+) | 939 | WP_011054114.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPYKS030_RS00665 (SPYKS030_00820) | comGB | 103117..104151 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPYKS030_RS00670 (SPYKS030_00830) | comGC | 104153..104479 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SPYKS030_RS00675 (SPYKS030_00840) | comGD | 104454..104882 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPYKS030_RS00680 (SPYKS030_00850) | comGE | 104839..105123 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPYKS030_RS00685 (SPYKS030_00860) | comGF | 105116..105550 (+) | 435 | WP_032462142.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPYKS030_RS00690 (SPYKS030_00870) | comGG | 105534..105860 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| SPYKS030_RS00695 (SPYKS030_00880) | comGH | 105958..106911 (+) | 954 | WP_011054117.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPYKS030_RS00700 (SPYKS030_00890) | - | 106970..108166 (+) | 1197 | WP_010921803.1 | acetate kinase | - |
| SPYKS030_RS00705 (SPYKS030_00900) | - | 108352..108660 (+) | 309 | WP_011054118.1 | hypothetical protein | - |
| SPYKS030_RS00710 (SPYKS030_00910) | proC | 108743..109513 (-) | 771 | WP_002992745.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10672.62 Da Isoelectric Point: 8.9043
>NTDB_id=57926 SPYKS030_RS00680 WP_002987779.1 104839..105123(+) (comGE) [Streptococcus pyogenes strain KS030]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=57926 SPYKS030_RS00680 WP_002987779.1 104839..105123(+) (comGE) [Streptococcus pyogenes strain KS030]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTGAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTGAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |