Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HU754_RS28325 Genome accession   NZ_CP077090
Coordinates   6427333..6427737 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas zeae strain OE 48.2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6422333..6432737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HU754_RS28310 (HU754_028310) - 6424242..6426290 (-) 2049 WP_093429842.1 methyl-accepting chemotaxis protein -
  HU754_RS28315 (HU754_028315) - 6426357..6426896 (-) 540 WP_186620027.1 chemotaxis protein CheW -
  HU754_RS28320 (HU754_028320) pilH 6426907..6427272 (-) 366 WP_007897961.1 twitching motility response regulator PilH -
  HU754_RS28325 (HU754_028325) pilG 6427333..6427737 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  HU754_RS28330 (HU754_028330) gshB 6427963..6428934 (+) 972 WP_186620029.1 glutathione synthase -
  HU754_RS28335 (HU754_028335) - 6429042..6429941 (+) 900 WP_093429840.1 energy transducer TonB -
  HU754_RS28340 (HU754_028340) - 6430115..6430687 (+) 573 WP_016985971.1 YqgE/AlgH family protein -
  HU754_RS28345 (HU754_028345) ruvX 6430687..6431124 (+) 438 WP_064589634.1 Holliday junction resolvase RuvX -
  HU754_RS28350 (HU754_028350) pyrR 6431205..6431711 (+) 507 WP_034153653.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=579065 HU754_RS28325 WP_007913673.1 6427333..6427737(-) (pilG) [Pseudomonas zeae strain OE 48.2]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=579065 HU754_RS28325 WP_007913673.1 6427333..6427737(-) (pilG) [Pseudomonas zeae strain OE 48.2]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACATTGTT
GAAGAATGTCGGTTGCGAAGTGATCACGGCGATCGACGGTTTCGATGCGTTGGCAAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCATTCAAG
GCCACGCCGGTGATCATGCTGTCATCGCGCGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701