Detailed information NTG0057903

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: SPN032672_RS09135
• Genome accession: NC_021003
• Coordinates: 1703858..1704124 (+)
• Length: 88 a.a.
• NCBI ID: WP_001818764.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae SPN032672
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1703286..1703780	1703858..1704124	flank	78

Gene organization within MGE regions

Location: 1703286..1704124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPN032672_RS09130	-	1703286..1703774 (+)	489	Protein_1706	transposase	-
SPN032672_RS09135	HI0659	1703858..1704124 (+)	267	WP_001818764.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9627.08 Da
• Isoelectric Point: 4.2720

>NTDB_id=57903 SPN032672_RS09135 WP_001818764.1 1703858..1704124(+) (HI0659) [Streptococcus pneumoniae SPN032672]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=57903 SPN032672_RS09135 WP_001818764.1 1703858..1704124(+) (HI0659) [Streptococcus pneumoniae SPN032672]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	57.143	87.5	0.5