Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HU749_RS28070 Genome accession   NZ_CP077086
Coordinates   6339673..6340101 (-) Length   142 a.a.
NCBI ID   WP_003206467.1    Uniprot ID   A0A0F4XQR2
Organism   Pseudomonas ogarae strain SWRI108     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6334673..6345101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HU749_RS28055 (HU749_028055) - 6336434..6338497 (-) 2064 WP_079302961.1 methyl-accepting chemotaxis protein -
  HU749_RS28060 (HU749_028060) - 6338709..6339248 (-) 540 WP_014340665.1 chemotaxis protein CheW -
  HU749_RS28065 (HU749_028065) pilH 6339259..6339624 (-) 366 WP_003206465.1 twitching motility response regulator PilH -
  HU749_RS28070 (HU749_028070) pilG 6339673..6340101 (-) 429 WP_003206467.1 response regulator Regulator
  HU749_RS28075 (HU749_028075) gshB 6340326..6341279 (+) 954 WP_003206468.1 glutathione synthase -
  HU749_RS28080 (HU749_028080) - 6341356..6342252 (+) 897 WP_057449546.1 energy transducer TonB -
  HU749_RS28085 (HU749_028085) - 6342463..6343032 (+) 570 WP_014340668.1 YqgE/AlgH family protein -
  HU749_RS28090 (HU749_028090) ruvX 6343032..6343469 (+) 438 WP_003177497.1 Holliday junction resolvase RuvX -
  HU749_RS28095 (HU749_028095) pyrR 6343554..6344060 (+) 507 WP_014340669.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HU749_RS28100 (HU749_028100) - 6344085..6345089 (+) 1005 WP_003177495.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15493.95 Da        Isoelectric Point: 7.4360

>NTDB_id=578978 HU749_RS28070 WP_003206467.1 6339673..6340101(-) (pilG) [Pseudomonas ogarae strain SWRI108]
MAEHLTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAVDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKN
NSAFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=578978 HU749_RS28070 WP_003206467.1 6339673..6340101(-) (pilG) [Pseudomonas ogarae strain SWRI108]
ATGGCAGAGCATCTCACGCAGCAGCAACCCAGCGCCTTGAAAGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCAC
CGCCGAAACCTTGCTGCGCAACGTGGGCTGCGAGGTGATCACGGCCGTCGATGGCTTCGATGCCCTGGCCAAGATCGCCG
ACCATCATCCGGGCATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCCCTGATCAAGAAC
AACAGCGCGTTCAAGGCCACGCCGGTGATCATGCTGTCGTCCCGCGACGGGTTGTTCGACAAGGCCAAGGGACGCATCGT
CGGTTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGGGCGATACAGGCCCATGTCCCGGGCTTTG
CCGCTGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F4XQR2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.966

83.099

0.648