Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HU773_RS26300 Genome accession   NZ_CP077085
Coordinates   5849285..5849692 (-) Length   135 a.a.
NCBI ID   WP_032858786.1    Uniprot ID   -
Organism   Pseudomonas shahriarae strain SWRI52     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5844285..5854692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HU773_RS26285 (HU773_026285) - 5846278..5848329 (-) 2052 WP_057960880.1 methyl-accepting chemotaxis protein -
  HU773_RS26290 (HU773_026290) - 5848326..5848862 (-) 537 WP_057960881.1 chemotaxis protein CheW -
  HU773_RS26295 (HU773_026295) pilH 5848875..5849240 (-) 366 WP_057440367.1 twitching motility response regulator PilH -
  HU773_RS26300 (HU773_026300) pilG 5849285..5849692 (-) 408 WP_032858786.1 twitching motility response regulator PilG Regulator
  HU773_RS26305 (HU773_026305) gshB 5849931..5850884 (+) 954 WP_029300457.1 glutathione synthase -
  HU773_RS26310 (HU773_026310) - 5850962..5851861 (+) 900 WP_115129202.1 energy transducer TonB -
  HU773_RS26315 (HU773_026315) - 5851962..5852531 (+) 570 WP_057960883.1 YqgE/AlgH family protein -
  HU773_RS26320 (HU773_026320) ruvX 5852531..5852968 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  HU773_RS26325 (HU773_026325) pyrR 5853051..5853557 (+) 507 WP_057444186.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HU773_RS26330 (HU773_026330) - 5853582..5854586 (+) 1005 WP_057440370.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14934.46 Da        Isoelectric Point: 7.3843

>NTDB_id=578950 HU773_RS26300 WP_032858786.1 5849285..5849692(-) (pilG) [Pseudomonas shahriarae strain SWRI52]
MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=578950 HU773_RS26300 WP_032858786.1 5849285..5849692(-) (pilG) [Pseudomonas shahriarae strain SWRI52]
ATGGAACAGCATTCCAACGCCTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGCCGCACCGCTGAAACGCTGTT
GAAGAACGTGGGGTGCGAAGTCATCACGGCCATCGACGGTTTTGATGCCCTGGCCAGGATCGTTGACCACCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTCAAGAACAACCCGGCGTTCAAG
GCCATTCCGGTGATCATGCTCTCGTCCAGGGACGGCCTGTTCGACAAAGCCAAGGGGCGCATCGTCGGCGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTATGTGCCGGGTTTCGCTGCAGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659