Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   MUA83_RS08995 Genome accession   NZ_CP094763
Coordinates   1844683..1845957 (+) Length   424 a.a.
NCBI ID   WP_262528897.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6221     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1839683..1850957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA83_RS08975 (MUA83_08970) - 1841007..1841102 (+) 96 WP_031761395.1 hypothetical protein -
  MUA83_RS08980 (MUA83_08975) - 1841063..1842193 (-) 1131 WP_000721713.1 HAD family hydrolase -
  MUA83_RS08985 (MUA83_08980) nagE 1842300..1843766 (-) 1467 WP_000276354.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  MUA83_RS08990 (MUA83_08985) - 1843894..1844511 (-) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  MUA83_RS08995 (MUA83_08990) htrA 1844683..1845957 (+) 1275 WP_262528897.1 S1C family serine protease Regulator
  MUA83_RS09000 (MUA83_08995) tyrS 1846051..1847313 (-) 1263 WP_000186028.1 tyrosine--tRNA ligase -
  MUA83_RS09005 (MUA83_09000) - 1847694..1848599 (+) 906 WP_000184373.1 transglycosylase domain-containing protein -
  MUA83_RS09010 (MUA83_09005) - 1848579..1848671 (-) 93 WP_041201409.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45718.86 Da        Isoelectric Point: 9.8224

>NTDB_id=578907 MUA83_RS08995 WP_262528897.1 1844683..1845957(+) (htrA) [Staphylococcus aureus strain IVB6221]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVIAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=578907 MUA83_RS08995 WP_262528897.1 1844683..1845957(+) (htrA) [Staphylococcus aureus strain IVB6221]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGAGTAGGTTCAGGTGTCATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTATAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGTGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATTGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGACCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAGCCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGACAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368