Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KSS95_RS05065 Genome accession   NZ_CP077073
Coordinates   1115549..1115950 (+) Length   133 a.a.
NCBI ID   WP_217852188.1    Uniprot ID   -
Organism   Pseudomonas muyukensis strain COW39     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1110549..1120950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KSS95_RS05040 (KSS95_05040) pyrR 1111474..1111992 (-) 519 WP_217852179.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KSS95_RS05045 (KSS95_05045) ruvX 1112046..1112471 (-) 426 WP_028688357.1 Holliday junction resolvase RuvX -
  KSS95_RS05050 (KSS95_05050) - 1112471..1113040 (-) 570 WP_217852181.1 YqgE/AlgH family protein -
  KSS95_RS05055 (KSS95_05055) - 1113308..1114207 (-) 900 WP_217852183.1 energy transducer TonB -
  KSS95_RS05060 (KSS95_05060) gshB 1114299..1115252 (-) 954 WP_217852186.1 glutathione synthase -
  KSS95_RS05065 (KSS95_05065) pilG 1115549..1115950 (+) 402 WP_217852188.1 twitching motility response regulator PilG Regulator
  KSS95_RS05070 (KSS95_05070) pilH 1115998..1116363 (+) 366 WP_217852190.1 twitching motility response regulator PilH -
  KSS95_RS05075 (KSS95_05075) - 1116360..1116914 (+) 555 WP_217852192.1 chemotaxis protein CheW -
  KSS95_RS05080 (KSS95_05080) - 1116965..1119004 (+) 2040 WP_217853935.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14684.03 Da        Isoelectric Point: 6.7047

>NTDB_id=578638 KSS95_RS05065 WP_217852188.1 1115549..1115950(+) (pilG) [Pseudomonas muyukensis strain COW39]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPRIIFVDVLMPRLDGYQTCAIIKHNNAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRACVPGFVAQDSHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=578638 KSS95_RS05065 WP_217852188.1 1115549..1115950(+) (pilG) [Pseudomonas muyukensis strain COW39]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
CGGCTGCGAGGTGATCACCGCCAGCGACGGCTTCGACGCCCTGGCCAAGATCGTCGACCACAAGCCCCGGATCATCTTCG
TCGATGTGCTGATGCCGCGCCTTGACGGTTACCAGACCTGCGCCATCATCAAGCACAACAACGCATTCAAGGACACCCCG
GTGATCCTGCTCTCTTCCCGCGATGGCTTGTTCGACAAGGCCCGTGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCATTCAGCAAGGAAGAGCTGCTCGACGCGATCCGTGCCTGCGTGCCCGGTTTCGTCGCGCAGGATTCACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.167

90.226

0.624