Detailed information NTG0578391

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: N578_RS06080
• Genome accession: NZ_CP076835
• Coordinates: 1155827..1156786 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni X voucher NCTC 13357
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1150827..1161786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N578_RS06055 (N578_06055)	neuC	1151392..1152507 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
N578_RS09705 (N578_06060)	-	1152504..1153418 (+)	915	Protein_1185	beta-1,4-N-acetylgalactosaminyltransferase	-
N578_RS09710 (N578_06065)	-	1153452..1154114 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
N578_RS06070 (N578_06070)	-	1154109..1154960 (-)	852	WP_043020460.1	glycosyltransferase	-
N578_RS06075 (N578_06075)	waaV	1154944..1155768 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
N578_RS06080 (N578_06080)	waaF	1155827..1156786 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
N578_RS06085 (N578_06085)	gmhA	1156767..1157327 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
N578_RS06090 (N578_06090)	rfaE1	1157324..1158709 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
N578_RS06095 (N578_06095)	rfaD	1158702..1159655 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
N578_RS06100 (N578_06100)	gmhB	1159656..1160216 (-)	561	WP_021357985.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
N578_RS06105 (N578_06105)	-	1160298..1160600 (+)	303	WP_002852762.1	cytochrome c	-
N578_RS06110 (N578_06110)	ccoS	1160623..1160829 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=578391 N578_RS06080 WP_002875425.1 1155827..1156786(+) (waaF) [Campylobacter jejuni X voucher NCTC 13357]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=578391 N578_RS06080 WP_002875425.1 1155827..1156786(+) (waaF) [Campylobacter jejuni X voucher NCTC 13357]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1