Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | N578_RS05730 | Genome accession | NZ_CP076835 |
| Coordinates | 1085556..1085858 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni X voucher NCTC 13357 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1080556..1090858
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N578_RS05705 (N578_05705) | rpsR | 1080919..1081179 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| N578_RS05710 (N578_05710) | lon | 1081239..1083614 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| N578_RS05715 (N578_05715) | - | 1083631..1084278 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| N578_RS05720 (N578_05720) | fliW | 1084439..1084828 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| N578_RS05725 (N578_05725) | proC | 1084828..1085559 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| N578_RS05730 (N578_05730) | ctsT | 1085556..1085858 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| N578_RS05735 (N578_05735) | - | 1085855..1086517 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| N578_RS05740 (N578_05740) | - | 1086514..1086966 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| N578_RS05745 (N578_05745) | hemD | 1086963..1087592 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| N578_RS05750 (N578_05750) | thiE | 1087570..1088202 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| N578_RS05755 (N578_05755) | thiD | 1088192..1089004 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| N578_RS05760 (N578_05760) | - | 1089001..1089687 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| N578_RS05765 (N578_05765) | - | 1089684..1090445 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=578389 N578_RS05730 WP_002853046.1 1085556..1085858(+) (ctsT) [Campylobacter jejuni X voucher NCTC 13357]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=578389 N578_RS05730 WP_002853046.1 1085556..1085858(+) (ctsT) [Campylobacter jejuni X voucher NCTC 13357]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |