Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   L6J92_RS09270 Genome accession   NZ_CP094676
Coordinates   2076603..2077382 (-) Length   259 a.a.
NCBI ID   WP_031035398.1    Uniprot ID   A0ABS7WDF7
Organism   Streptomyces sp. CB09030     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2071603..2082382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6J92_RS09260 (L6J92_09260) - 2073558..2074190 (+) 633 WP_243780860.1 GNAT family N-acetyltransferase -
  L6J92_RS09265 (L6J92_09265) - 2074427..2076403 (+) 1977 WP_194275699.1 ATP-dependent DNA helicase -
  L6J92_RS09270 (L6J92_09270) dinR/lexA 2076603..2077382 (-) 780 WP_031035398.1 transcriptional repressor LexA Regulator
  L6J92_RS09275 (L6J92_09275) nrdR 2078046..2078609 (+) 564 WP_194275698.1 transcriptional regulator NrdR -
  L6J92_RS09280 (L6J92_09280) - 2078778..2081681 (+) 2904 WP_031035394.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27940.69 Da        Isoelectric Point: 7.0665

>NTDB_id=578075 L6J92_RS09270 WP_031035398.1 2076603..2077382(-) (dinR/lexA) [Streptomyces sp. CB09030]
MTTTADSAIITAQDRPQGRPEPVHAMSDAANPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=578075 L6J92_RS09270 WP_031035398.1 2076603..2077382(-) (dinR/lexA) [Streptomyces sp. CB09030]
GTGACCACCACCGCCGACAGTGCCATCATCACTGCCCAGGACCGCCCCCAGGGCCGACCTGAGCCGGTGCACGCGATGAG
CGACGCCGCGAACCCGGAGGGGCACAAGCGCTCCCTGCCGGGCCGACCTCCGGGCATCCGGGCGGACAGCTCCGGGCTGA
CCGACCGCCAGCGCCGGGTGATCGAGGTCATCCGCGACTCGGTGCAGCGGCGTGGATACCCGCCGTCGATGCGGGAGATC
GGGCAGGCCGTCGGCCTCTCCAGCACCTCCTCCGTCGCGCACCAGCTGATGGCGCTGGAGCGCAAGGGCTTCCTGCGTCG
CGACCCGCACCGTCCGCGCGCCTACGAGGTGCGCGGCTCCGACCAGGCCGCCTCGGTGCAGCCGACGGACACCGCCGGCA
AGCCCGCCGCGTCGTACGTCCCGCTCGTCGGGCGCATCGCCGCCGGTGGTCCGATCCTCGCCGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTTCCCCGGCAGCTGGTCGGCGACGGCGAGCTGTTCGTGCTGAAGGTCGTCGGCGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCGGCCATGCTCG
ACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACGCGGCGTACGAGCCG
ATCCCCGGTGACGACGCGACCATCCTCGGCAAGGTGGTAGCCGTACTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(141-253)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375