Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | L6J92_RS02290 | Genome accession | NZ_CP094676 |
| Coordinates | 513464..515989 (+) | Length | 841 a.a. |
| NCBI ID | WP_194276596.1 | Uniprot ID | - |
| Organism | Streptomyces sp. CB09030 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 508464..520989
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6J92_RS02255 (L6J92_02255) | - | 508758..509555 (+) | 798 | WP_031047256.1 | type III pantothenate kinase | - |
| L6J92_RS02260 (L6J92_02260) | - | 509785..510438 (+) | 654 | WP_243780346.1 | hypothetical protein | - |
| L6J92_RS02265 (L6J92_02265) | - | 510462..510641 (+) | 180 | WP_031047252.1 | hypothetical protein | - |
| L6J92_RS02270 (L6J92_02270) | - | 510757..511179 (+) | 423 | WP_078535871.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| L6J92_RS02275 (L6J92_02275) | - | 511190..511699 (+) | 510 | WP_031047246.1 | amino-acid N-acetyltransferase | - |
| L6J92_RS02280 (L6J92_02280) | - | 512017..512352 (+) | 336 | WP_031047244.1 | Lsr2 family protein | - |
| L6J92_RS02285 (L6J92_02285) | - | 512367..513033 (-) | 667 | Protein_450 | SCO3374 family protein | - |
| L6J92_RS02290 (L6J92_02290) | clpC | 513464..515989 (+) | 2526 | WP_194276596.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| L6J92_RS02295 (L6J92_02295) | - | 516051..519020 (-) | 2970 | WP_243780347.1 | NACHT domain-containing protein | - |
Sequence
Protein
Download Length: 841 a.a. Molecular weight: 93002.07 Da Isoelectric Point: 5.7484
>NTDB_id=578052 L6J92_RS02290 WP_194276596.1 513464..515989(+) (clpC) [Streptomyces sp. CB09030]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEEALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAAGDTKSNYDRMKNKVQDELKQHFRPEFLNRVDDVVVFPQLS
QEDILRIVDLMIDKVDERLKDRDMGLELSQSAKELLSKRGYDPVLGARPLRRTIQREVEDSLSEKILFGELRPGHIVVVD
TEGEGDTATFTFRGEEKSSLPDAPPIEQAAGGAGPNLSKEA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEEALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAAGDTKSNYDRMKNKVQDELKQHFRPEFLNRVDDVVVFPQLS
QEDILRIVDLMIDKVDERLKDRDMGLELSQSAKELLSKRGYDPVLGARPLRRTIQREVEDSLSEKILFGELRPGHIVVVD
TEGEGDTATFTFRGEEKSSLPDAPPIEQAAGGAGPNLSKEA
Nucleotide
Download Length: 2526 bp
>NTDB_id=578052 L6J92_RS02290 WP_194276596.1 513464..515989(+) (clpC) [Streptomyces sp. CB09030]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGCCAGCAGGCCCCGTCGGGTCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTTCTGGAGCTGTCGCTCCGCGAGGCCCTCCAGCTGGGTCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGTGAGGGCGAGGGTGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCCGACCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGTCCTGCGGAGGGCACG
CCCTCCACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACCAAGAACAACCCGGTGCTCATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCGCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTGGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTGCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCCGCGAGCATCCTCAAGCCGATGCTGGCCCGTGGCGAGCTGCAGACCATCGGTGCGACCACG
CTGGACGAGTACCGCAAGCATCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCGATCCAGGTCGCGGAGCCGTC
GCTGCCGCACACGATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCGCACCACCGCGTCTCCATCACGGACGAGG
CCCTCGTCCAGGCGGCGACGCTCGCCGACCGCTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGGCGT
GCGCCGGGACAAGGAGTCGGCCATCGACTCCCAGGACTTCGAGAAGGCCGCCTCCCTCCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGCGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCCACGGCGACGGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCGTCCCGCCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCCAAGGCGATCCGCCGTACCCGGGCCG
GCCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCCGAGTTCCTCTTCGGTGACGAGGAGGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
CTCCCGCCTCTTCGGTTCGCCCCCCGGCTACGTGGGCTACGAGGAGGGCGGCCAGCTGACGGAGAAGGTGCGCCGCAAGC
CGTTCTCGGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTCGGCTTCGCCGCCGCGGGCGACACCAAGTCGAACTACGACCGCATGAAGAACAAGG
TCCAGGACGAGCTGAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTGAGC
CAGGAGGACATCCTGCGGATCGTCGACCTGATGATCGACAAGGTCGACGAGCGGCTCAAGGACCGGGACATGGGCCTGGA
GCTCTCCCAGTCCGCGAAGGAGCTGCTGTCGAAGCGGGGTTACGACCCGGTGCTGGGTGCGCGTCCGCTGCGCCGCACGA
TCCAGCGCGAGGTCGAGGACTCGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGCCACATCGTGGTCGTGGAC
ACGGAGGGCGAGGGCGACACCGCGACCTTCACCTTCCGCGGCGAGGAGAAGTCGTCCCTCCCCGACGCCCCGCCGATCGA
GCAGGCAGCCGGCGGCGCCGGCCCGAACCTGAGCAAGGAGGCGTAG
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGCCAGCAGGCCCCGTCGGGTCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTTCTGGAGCTGTCGCTCCGCGAGGCCCTCCAGCTGGGTCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGTGAGGGCGAGGGTGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCCGACCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGTCCTGCGGAGGGCACG
CCCTCCACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACCAAGAACAACCCGGTGCTCATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCGCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTGGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTGCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCCGCGAGCATCCTCAAGCCGATGCTGGCCCGTGGCGAGCTGCAGACCATCGGTGCGACCACG
CTGGACGAGTACCGCAAGCATCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCGATCCAGGTCGCGGAGCCGTC
GCTGCCGCACACGATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCGCACCACCGCGTCTCCATCACGGACGAGG
CCCTCGTCCAGGCGGCGACGCTCGCCGACCGCTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGGCGT
GCGCCGGGACAAGGAGTCGGCCATCGACTCCCAGGACTTCGAGAAGGCCGCCTCCCTCCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGCGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCCACGGCGACGGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCGTCCCGCCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCCAAGGCGATCCGCCGTACCCGGGCCG
GCCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCCGAGTTCCTCTTCGGTGACGAGGAGGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
CTCCCGCCTCTTCGGTTCGCCCCCCGGCTACGTGGGCTACGAGGAGGGCGGCCAGCTGACGGAGAAGGTGCGCCGCAAGC
CGTTCTCGGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTCGGCTTCGCCGCCGCGGGCGACACCAAGTCGAACTACGACCGCATGAAGAACAAGG
TCCAGGACGAGCTGAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTGAGC
CAGGAGGACATCCTGCGGATCGTCGACCTGATGATCGACAAGGTCGACGAGCGGCTCAAGGACCGGGACATGGGCCTGGA
GCTCTCCCAGTCCGCGAAGGAGCTGCTGTCGAAGCGGGGTTACGACCCGGTGCTGGGTGCGCGTCCGCTGCGCCGCACGA
TCCAGCGCGAGGTCGAGGACTCGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGCCACATCGTGGTCGTGGAC
ACGGAGGGCGAGGGCGACACCGCGACCTTCACCTTCCGCGGCGAGGAGAAGTCGTCCCTCCCCGACGCCCCGCCGATCGA
GCAGGCAGCCGGCGGCGCCGGCCCGAACCTGAGCAAGGAGGCGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.721 |
95.363 |
0.589 |
| clpC | Streptococcus mutans UA159 |
44.578 |
98.692 |
0.44 |
| clpC | Streptococcus thermophilus LMD-9 |
43.266 |
99.762 |
0.432 |
| clpC | Streptococcus pneumoniae D39 |
44.458 |
95.482 |
0.424 |
| clpC | Streptococcus pneumoniae Rx1 |
44.458 |
95.482 |
0.424 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.827 |
96.314 |
0.422 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.486 |
94.887 |
0.422 |
| clpE | Streptococcus mutans UA159 |
54.153 |
74.435 |
0.403 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.871 |
73.722 |
0.397 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.809 |
74.078 |
0.391 |
| clpC | Streptococcus thermophilus LMG 18311 |
49.251 |
79.429 |
0.391 |
| clpE | Streptococcus pneumoniae R6 |
52.648 |
74.078 |
0.39 |
| clpE | Streptococcus pneumoniae D39 |
52.648 |
74.078 |
0.39 |
| clpE | Streptococcus pneumoniae Rx1 |
52.648 |
74.078 |
0.39 |