Detailed information NTG0577935

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: MTO79_RS10530
• Genome accession: NZ_CP094474
• Coordinates: 2091314..2093092 (+)
• Length: 592 a.a.
• NCBI ID: WP_058221656.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain SCB469
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2086314..2098092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTO79_RS10510 (MTO79_10510)	-	2086403..2088076 (-)	1674	WP_010906146.1	polysaccharide biosynthesis protein	-
MTO79_RS10515 (MTO79_10515)	-	2088286..2089737 (+)	1452	WP_003130330.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	-
MTO79_RS10520 (MTO79_10520)	-	2089765..2090076 (-)	312	WP_058221657.1	hypothetical protein	-
MTO79_RS10525 (MTO79_10525)	adhP	2090097..2091119 (-)	1023	WP_003130326.1	alcohol dehydrogenase AdhP	-
MTO79_RS10530 (MTO79_10530)	recQ	2091314..2093092 (+)	1779	WP_058221656.1	DNA helicase RecQ	Machinery gene
MTO79_RS10535 (MTO79_10535)	yjeM	2093128..2094654 (-)	1527	WP_058221655.1	glutamate/gamma-aminobutyrate family transporter YjeM	-
MTO79_RS10540 (MTO79_10540)	pepT	2094934..2096175 (-)	1242	WP_003130321.1	peptidase T	-
MTO79_RS10545 (MTO79_10545)	-	2096204..2097001 (-)	798	WP_010906148.1	DUF1803 domain-containing protein	-
MTO79_RS10550 (MTO79_10550)	-	2097001..2097945 (-)	945	WP_003130319.1	manganese-dependent inorganic pyrophosphatase	-

Sequence

Protein

• Length: 592 a.a.
• Molecular weight: 66958.82 Da
• Isoelectric Point: 6.4494

>NTDB_id=577935 MTO79_RS10530 WP_058221656.1 2091314..2093092(+) (recQ) [Lactococcus lactis strain SCB469]
MNLEAKLKEIFGYDNFRNGQKQIIEQVLDGQATLGILPTGAGKSICYQLPALIQPGLTLVISPLISLMKDQVDQLNIAGI
PATFINSTLEDSESYQRMRQVENGEIKLLFVAPERFSLDYFNAFLQKLPIDLVAIDEAHCISQWGHDFRPSYVDFASHLQ
YLPTNPTVLALTATATPKVADDIQKLISISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESEAAGIIYASTRKE
VEEICEWLNHNHFKSVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRFVIHYALPATIESYYQEAGRAG
RDGLESDANLLFSPNDLRIRNFLIEQSEGDEAHKEHEYEKLRQMQAYTSAETCLQRYILQYFGDEGEDCKKCSNCLDERE
LLDITIDAQKVLSCVVRMGERFGKTAVAQVLIGSKNKNIAKWNFESLSTFGIMKNHSQKTVGELIDFLSAESYLNITSGK
FPLLLLSAQGLKVLKGQIKVYRKASLIIESKTKISHHFDEECFASIRALRLELAKEEGVPPFMIFSDSALKEMAQVLPDS
QSQFLQISGVGPVKLKKYGRLFIDKISEYKKS

Nucleotide

• Length: 1779 bp

>NTDB_id=577935 MTO79_RS10530 WP_058221656.1 2091314..2093092(+) (recQ) [Lactococcus lactis strain SCB469]
ATGAATTTAGAAGCTAAATTAAAAGAAATTTTTGGTTATGACAATTTCCGAAATGGTCAGAAACAAATTATTGAACAAGT
CCTAGATGGACAAGCCACTCTTGGTATTTTACCCACAGGAGCTGGAAAATCAATCTGCTATCAGTTACCAGCTCTTATTC
AACCAGGGCTTACTCTCGTAATCTCCCCACTTATTAGCTTGATGAAAGATCAAGTCGACCAGCTGAATATTGCCGGAATT
CCAGCAACATTTATTAACTCTACCTTAGAGGATTCCGAATCTTATCAAAGAATGCGACAGGTTGAAAATGGCGAAATCAA
GCTTCTTTTTGTAGCACCAGAGCGTTTTTCATTAGACTATTTCAATGCCTTTTTACAAAAACTTCCAATTGATTTAGTTG
CCATAGACGAAGCACACTGCATTTCACAATGGGGGCACGATTTCAGACCCAGTTATGTCGATTTTGCCTCTCATCTCCAA
TATTTACCAACAAATCCTACCGTCTTAGCCCTTACGGCTACTGCGACACCAAAAGTTGCAGATGATATTCAAAAACTTAT
TTCAATTTCCCCCAGTCATACTATTAAAACCGGTTTTCTTAGAGAAAACTTACGTTTTGAAGTAGTCAAAGGGATGGATA
AGAGAACTTTTCTTAAAAATTATCTTAAAAATCAAGAAAGTGAGGCTGCTGGAATTATCTATGCCAGCACTCGTAAAGAA
GTTGAAGAAATTTGTGAATGGCTCAACCATAATCATTTCAAATCCGTTCGTTACCATGCTGGACTGAGCGAACAGGAACG
TCAAATAAATCAAGAACTTTTTCTCTTTGACGAAGTACCGATAATGGTTGCCACTAATGCTTTTGGCATGGGAATCAATA
AACCAAATGTTCGATTTGTGATTCATTATGCCCTTCCCGCAACAATTGAAAGTTATTATCAAGAAGCTGGGCGAGCAGGA
CGGGACGGGCTTGAATCTGATGCTAACCTCCTTTTTTCACCAAATGATTTACGAATTCGTAATTTCTTGATTGAGCAAAG
TGAAGGTGATGAAGCGCACAAGGAACATGAATACGAAAAGCTTCGACAAATGCAAGCATACACAAGTGCCGAAACCTGTT
TACAACGCTATATCTTGCAATATTTTGGTGATGAAGGTGAAGATTGTAAAAAATGTAGTAATTGTCTTGATGAAAGAGAG
CTTCTCGATATTACAATTGATGCTCAAAAAGTCCTATCTTGTGTCGTCCGAATGGGTGAACGTTTTGGTAAGACGGCCGT
AGCACAAGTTTTGATTGGTTCTAAAAATAAAAATATTGCCAAATGGAATTTTGAATCTCTATCGACTTTTGGAATTATGA
AAAACCATTCCCAAAAGACCGTGGGTGAATTAATCGATTTTCTATCTGCTGAAAGTTATTTAAACATTACATCAGGTAAA
TTCCCACTTCTCCTTCTTTCAGCCCAAGGATTAAAAGTCCTCAAAGGACAAATCAAAGTTTATCGCAAAGCTAGCCTAAT
TATTGAATCGAAAACAAAAATTTCTCATCATTTTGATGAAGAATGTTTTGCAAGTATTCGTGCACTTCGACTTGAACTAG
CCAAGGAAGAAGGCGTCCCTCCTTTCATGATTTTTTCTGATAGTGCCCTTAAAGAAATGGCTCAAGTTCTGCCGGATAGT
CAAAGTCAATTTTTACAAATTTCTGGTGTCGGACCTGTTAAACTCAAAAAATATGGAAGGCTTTTTATCGACAAAATATC
TGAATATAAAAAAAGCTGA

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (19-179)

• Helicase conserved C-terminal domain (Helicase_C) (214-322)

• HRDC domain (HRDC) (520-584)

• RecQ zinc-binding (RecQ_Zn_bind) (335-396)

• RQC domain (RQC) (399-503)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	50.937	99.155	0.505