Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KP952_RS04575 Genome accession   NZ_CP076731
Coordinates   905743..906537 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain Miz-8     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 900743..911537
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KP952_RS04545 (KP952_04545) sxzA 901582..902613 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  KP952_RS04550 (KP952_04550) yfhB 902728..903609 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  KP952_RS04555 (KP952_04555) yfhC 903697..904281 (+) 585 WP_032723010.1 nitroreductase -
  KP952_RS04560 (KP952_04560) yfhD 904320..904511 (-) 192 WP_003233561.1 YfhD family protein -
  KP952_RS04565 (KP952_04565) yfhE 904578..904688 (-) 111 WP_003223230.1 YfhE family protein -
  KP952_RS04570 (KP952_04570) yfhF 904743..905654 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  KP952_RS04575 (KP952_04575) recX 905743..906537 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  KP952_RS04580 (KP952_04580) yfhH 906539..906853 (+) 315 WP_003244592.1 YfhH family protein -
  KP952_RS04585 (KP952_04585) yfhI 906996..908189 (+) 1194 WP_003243500.1 MFS transporter -
  KP952_RS04590 (KP952_04590) sspK 908221..908373 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KP952_RS04595 (KP952_04595) yfhJ 908498..908767 (+) 270 WP_003243789.1 YfhJ family protein -
  KP952_RS04600 (KP952_04600) yfhK 908912..909430 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  KP952_RS04605 (KP952_04605) spdL 909515..909847 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  KP952_RS04610 (KP952_04610) ephM 909834..910694 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=577734 KP952_RS04575 WP_014479217.1 905743..906537(+) (recX) [Bacillus subtilis subsp. subtilis strain Miz-8]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=577734 KP952_RS04575 WP_014479217.1 905743..906537(+) (recX) [Bacillus subtilis subsp. subtilis strain Miz-8]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992