Detailed information NTG0577648

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: MQC90_RS08270
• Genome accession: NZ_CP094361
• Coordinates: 1572363..1573388 (+)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain NCIB 3610
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1567363..1578388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MQC90_RS08235	ylbE	1567663..1567902 (+)	240	WP_003232231.1	YlbE-like family protein	-
MQC90_RS08240	ylbF	1568018..1568467 (+)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
MQC90_RS08245	ylbG	1568522..1568794 (+)	273	WP_009967171.1	YlbG family protein	-
MQC90_RS08250	rsmD	1569117..1569671 (+)	555	WP_003232227.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
MQC90_RS08255	coaD	1569676..1570161 (+)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
MQC90_RS08260	spoVV	1570172..1571398 (-)	1227	WP_003245492.1	dipicolinic acid transporter SpoVV	-
MQC90_RS08265	ylbK	1571579..1572361 (+)	783	WP_003232221.1	patatin family protein	-
MQC90_RS08270	sepM	1572363..1573388 (+)	1026	WP_003245451.1	protease DdcP	Regulator
MQC90_RS08275	ylbM	1573405..1574652 (-)	1248	WP_003244707.1	nucleotidyltransferase	-
MQC90_RS08280	-	1574649..1574834 (-)	186	WP_003232215.1	hypothetical protein	-
MQC90_RS08285	ylbN	1574862..1575380 (+)	519	WP_003232214.1	DUF177 domain-containing protein	-
MQC90_RS08290	rpmF	1575402..1575581 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
MQC90_RS08295	gerR	1575727..1576308 (+)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
MQC90_RS08300	ylbP	1576365..1576847 (-)	483	WP_003244940.1	N-acetyltransferase	-
MQC90_RS08305	-	1577007..1577903 (+)	897	WP_003232206.1	2-dehydropantoate 2-reductase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=577648 MQC90_RS08270 WP_003245451.1 1572363..1573388(+) (sepM) [Bacillus subtilis strain NCIB 3610]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=577648 MQC90_RS08270 WP_003245451.1 1572363..1573388(+) (sepM) [Bacillus subtilis strain NCIB 3610]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402