Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MQE23_RS12370 Genome accession   NZ_CP094344
Coordinates   2733131..2733910 (+) Length   259 a.a.
NCBI ID   WP_020274563.1    Uniprot ID   S4MNR9
Organism   Streptomyces sp. HP-A2021     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2728131..2738910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQE23_RS12360 (MQE23_12360) - 2728909..2731785 (-) 2877 WP_243379187.1 vitamin B12-dependent ribonucleotide reductase -
  MQE23_RS12365 (MQE23_12365) nrdR 2731950..2732510 (-) 561 WP_037670983.1 transcriptional regulator NrdR -
  MQE23_RS12370 (MQE23_12370) dinR/lexA 2733131..2733910 (+) 780 WP_020274563.1 transcriptional repressor LexA Regulator
  MQE23_RS12375 (MQE23_12375) - 2734124..2736100 (-) 1977 WP_020274562.1 ATP-dependent DNA helicase -
  MQE23_RS12380 (MQE23_12380) - 2736376..2737287 (-) 912 WP_020274561.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27962.69 Da        Isoelectric Point: 7.0666

>NTDB_id=577508 MQE23_RS12370 WP_020274563.1 2733131..2733910(+) (dinR/lexA) [Streptomyces sp. HP-A2021]
MTTTADSAAITAQDRSQGRLEPVHAMTEATNPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=577508 MQE23_RS12370 WP_020274563.1 2733131..2733910(+) (dinR/lexA) [Streptomyces sp. HP-A2021]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGGACCGCTCCCAGGGCCGACTGGAGCCGGTGCACGCGATGAC
CGAAGCCACGAACCCTGAGGGGCACAAGCGCTCCCTGCCGGGACGACCTCCCGGCATCCGGGCGGACAGTTCCGGACTCA
CCGACCGCCAGCGCCGTGTGATCGAGGTCATCAGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCGATGCGCGAGATC
GGCCAGGCCGTGGGCCTGTCCAGCACGTCCTCCGTCGCACACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGTCCGCGCGCGTACGAGGTGCGCGGTTCCGACCAGGCCGCCTCCGTGCAGCCCACGGACACCGCGGGCA
AGCCGGCCGCGTCGTACGTCCCGCTGGTCGGCCGCATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCCGTCGAGGAC
GTCTTCCCCCTCCCTCGCCAGCTCGTCGGCGACGGTGAGCTCTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGAGGC
TGCCATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCCGCGATGCTGG
ACGGAGAAGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTGCCGCACAACGCGGCGTACGAGCCG
ATCCCCGGCGACGACGCGACCATCCTCGGCAAGGTGGTGGCCGTACTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(141-253)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S4MNR9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375