NTDB

Overview

Name	cytR	Type	Regulator
Locus tag	MQE23_RS00820	Genome accession	NZ_CP094344
Coordinates	153840..154853 (-)	Length	337 a.a.
NCBI ID	WP_243377856.1	Uniprot ID	-
Organism	Streptomyces sp. HP-A2021
Function	promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 148840..159853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MQE23_RS00795 (MQE23_00795)	-	149990..150586 (+)	597	WP_243377853.1	hypothetical protein	-
MQE23_RS00800 (MQE23_00800)	-	151056..151487 (-)	432	WP_243377854.1	HIT family protein	-
MQE23_RS43450	-	151675..151797 (-)	123	WP_279345108.1	hypothetical protein	-
MQE23_RS00805 (MQE23_00805)	-	151811..151909 (-)	99	Protein_165	aldehyde dehydrogenase family protein	-
MQE23_RS00810 (MQE23_00810)	-	152058..152720 (-)	663	WP_243377855.1	hypothetical protein	-
MQE23_RS00815 (MQE23_00815)	-	152953..153645 (-)	693	WP_128092432.1	hypothetical protein	-
MQE23_RS00820 (MQE23_00820)	cytR	153840..154853 (-)	1014	WP_243377856.1	LacI family DNA-binding transcriptional regulator	Regulator
MQE23_RS00825 (MQE23_00825)	-	155180..156145 (+)	966	WP_020269264.1	glycoside hydrolase family 6 protein	-
MQE23_RS00830 (MQE23_00830)	-	156345..156704 (-)	360	WP_020269265.1	hypothetical protein	-
MQE23_RS00835 (MQE23_00835)	-	156774..157745 (+)	972	WP_243377857.1	Clp protease N-terminal domain-containing protein	-
MQE23_RS00840 (MQE23_00840)	-	157915..158193 (+)	279	WP_243377858.1	polyprenyl synthetase	-
MQE23_RS00845 (MQE23_00845)	-	158183..159235 (+)	1053	WP_243377859.1	polyprenyl synthetase family protein	-

Sequence

Protein

Download Length: 337 a.a. Molecular weight: 35607.51 Da Isoelectric Point: 5.9249

                                >NTDB_id=577489 MQE23_RS00820 WP_243377856.1 153840..154853(-) (cytR) [Streptomyces sp. HP-A2021]

MAELAPRRQPTLDEVAERAGVSRSVASRALNNAPHVSRAKREAVERAVRQLGYVPNPTARALATRQTGAAALVVSGEDPS

IFADPFYAQVIVGASTALEEADLHLMLCLAASDRGRKRVEELFRSKGADGVMLMALREDDPLAGMAEEAEMPVVFGGRPV

GSAPRWYVDVDNVGGAREATEYLVSCGRTRVAAICGRLDTEAGRARYRGYRDALLAAGLDPLPPHEGDFTEPSGAAAMAA

LLAHHPDVDGVFAANDNMAAGALRTLRAAGRAVPADIAVVGFDDLTVAQVADPPLTTVHQPITALGREMARMLVTVINGH

DPTPLILPTRLVTRSSA

Nucleotide

Download Length: 1014 bp

                                >NTDB_id=577489 MQE23_RS00820 WP_243377856.1 153840..154853(-) (cytR) [Streptomyces sp. HP-A2021]

ATGGCAGAACTTGCGCCGCGTCGGCAGCCGACGCTCGACGAGGTGGCCGAACGCGCCGGTGTCTCCCGATCCGTGGCCTC

CCGTGCCCTCAACAACGCGCCGCATGTCAGCCGCGCCAAACGGGAGGCGGTCGAACGGGCTGTCCGGCAACTCGGTTATG

TGCCCAATCCGACCGCCCGTGCTCTGGCCACCCGTCAGACGGGAGCGGCCGCCCTGGTCGTCTCGGGAGAGGATCCGTCG

ATCTTCGCGGATCCGTTCTACGCCCAGGTGATCGTGGGGGCGTCGACCGCTTTGGAGGAGGCCGATCTGCATCTGATGCT

GTGTCTGGCCGCTTCCGACCGGGGCCGCAAGCGGGTGGAGGAGCTCTTCCGGTCCAAGGGGGCCGACGGGGTCATGCTGA

TGGCGCTGCGCGAGGACGATCCGCTGGCCGGTATGGCCGAGGAGGCGGAGATGCCTGTCGTGTTCGGAGGGCGCCCCGTC

GGTTCGGCGCCCCGCTGGTATGTGGACGTCGACAACGTCGGGGGAGCGCGCGAGGCGACCGAGTACCTGGTTTCGTGCGG

CCGGACTCGCGTGGCTGCGATCTGCGGGCGTCTGGACACCGAGGCCGGGCGTGCCCGGTACCGCGGCTACCGGGACGCCT

TGCTGGCGGCCGGCCTCGATCCGTTGCCGCCGCATGAAGGGGACTTCACCGAGCCCAGCGGAGCCGCCGCCATGGCTGCC

CTGCTGGCGCACCACCCCGACGTGGACGGGGTGTTCGCCGCCAACGACAACATGGCGGCGGGGGCGCTGCGCACGTTGCG

TGCGGCCGGCCGGGCGGTCCCCGCCGACATCGCTGTGGTCGGCTTTGACGACCTGACCGTCGCCCAGGTCGCCGACCCGC

CCCTCACCACCGTCCATCAGCCCATAACGGCTCTCGGGCGGGAGATGGCGCGCATGCTCGTCACGGTCATCAACGGACAC

GACCCCACCCCGTTGATCCTGCCCACGCGCCTGGTCACCCGCTCGAGTGCCTGA

Domains

Predicted by InterProScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(180-336)

Bacterial regulatory proteins, lacI family (LacI)

(11-56)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
cytR	Vibrio cholerae C6706	36.499	100	0.365

Detailed information NTG0577489