Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | KRG72_RS08715 | Genome accession | NZ_CP076703 |
| Coordinates | 1757040..1759481 (-) | Length | 813 a.a. |
| NCBI ID | WP_258255128.1 | Uniprot ID | - |
| Organism | Streptococcus equinus strain S1 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1752040..1764481
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KRG72_RS08695 (KRG72_08700) | - | 1752880..1753698 (+) | 819 | WP_258255125.1 | hypothetical protein | - |
| KRG72_RS08700 (KRG72_08705) | - | 1753725..1754996 (+) | 1272 | WP_074869506.1 | toxic anion resistance protein | - |
| KRG72_RS08705 (KRG72_08710) | hslO | 1755117..1755983 (+) | 867 | WP_258255127.1 | Hsp33 family molecular chaperone HslO | - |
| KRG72_RS08710 (KRG72_08715) | dusB | 1755976..1756953 (+) | 978 | WP_074482354.1 | tRNA dihydrouridine synthase DusB | - |
| KRG72_RS08715 (KRG72_08720) | clpC | 1757040..1759481 (-) | 2442 | WP_258255128.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| KRG72_RS08720 (KRG72_08725) | - | 1759478..1759939 (-) | 462 | WP_039696152.1 | CtsR family transcriptional regulator | - |
| KRG72_RS08725 (KRG72_08730) | - | 1760197..1760667 (+) | 471 | WP_258255129.1 | small multi-drug export protein | - |
| KRG72_RS08730 (KRG72_08735) | tsf | 1760767..1761804 (-) | 1038 | WP_074869514.1 | translation elongation factor Ts | - |
| KRG72_RS08735 (KRG72_08740) | rpsB | 1761913..1762680 (-) | 768 | WP_021143273.1 | 30S ribosomal protein S2 | - |
| KRG72_RS08745 (KRG72_08750) | - | 1763219..1763740 (-) | 522 | WP_258255131.1 | transporter | - |
| KRG72_RS08750 (KRG72_08755) | - | 1764097..1764372 (-) | 276 | WP_074626771.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 89991.48 Da Isoelectric Point: 6.3763
>NTDB_id=577488 KRG72_RS08715 WP_258255128.1 1757040..1759481(-) (clpC) [Streptococcus equinus strain S1]
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLTFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGRDKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIIDGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYETFHNVTISDQ
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPEALTAADKAILEGDFKKATKLLKASRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKAYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLVATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTLQDKVEDKLSELILAGDLASGNTLK
IGVSKGQLKFDIA
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLTFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGRDKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIIDGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYETFHNVTISDQ
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPEALTAADKAILEGDFKKATKLLKASRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKAYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLVATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTLQDKVEDKLSELILAGDLASGNTLK
IGVSKGQLKFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=577488 KRG72_RS08715 WP_258255128.1 1757040..1759481(-) (clpC) [Streptococcus equinus strain S1]
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTATCAGGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCAGCTGTTTTGGCACTCGGGAAATCACCTTTGGCAGATGTTAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCTTAAAAGACGTCTTAACTTTTGCTGAGTCAATTTGCAAAGTGACTGGCAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTGCGTAAATCATTGTCACGTAATGCTGGATTTACTAAAGAA
AAAATCAAAGCTATTCACGATCTTCGCAAACCCAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTAACTGAATTAGCTCGTCAAGGAAAACTTGAACCAGTTATTG
GTCGTGATAAAGAAATTTCACGTATGGTTCAAGTCCTTAGCCGTAAAACTAAAAACAACCCTGTCTTGGTCGGTGAAGCT
GGTGTTGGTAAAACAGCTCTTGCTTATGGTTTGGCACAACGAATTATTGATGGTGAGATTCCATACGAACTTCAAGACAT
GCGTGTTCTAGAACTTGATATGATGAGTGTTGTGGCTGGTACGCGTTTCCGCGGTGACTTCGAAGAACGCATGAATCAAA
TCATCTCTGATATTGAAGAAGATGGTCACATCATTTTATTCATCGATGAAGTGCACACTATTATGGGATCTGGTTCTGGA
ATTGATAGTACTTTAGATGCTGCTAATATTTTAAAACCAGCTCTTGCACGTGGGACACTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAGCATATTGAAAAAGATGCTGCGCTTTCTCGTCGTTTTGCTAAAATCACCATCGAAGAACCAA
GTGTTGAAGATGCTTATCAAATTTTACTTGGGCTTAAGAAATCTTACGAAACTTTCCATAATGTGACGATTTCTGATCAA
GCTGTGTTGACGGCTGTTAAAGCTGCACACCGTTATTTGACAAGTAAAAATCTACCAGATTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACTGTTCAAGGTTTGGTTAAAAAAGAAGCCCCAGAAGCTCTTACAGCTGCAGATAAAGCTATTTTAG
AAGGTGATTTCAAAAAAGCTACGAAATTGCTGAAAGCTTCACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGATATCATGGCAACACTTAGCCGTCTGTCAGGTATTCCTGTTGAAAAAATGACGCAAGCTGACAGTAAGAAATATTT
GACGCTTGAAAAAGAGCTTCACAAACGTGTGATTGGTCAAGATGCTGCTATTTCAGCGATTAGCCGAGCAATCCGTCGTA
ATCAAGCAGGTATCCGCACAGGAAAACGTCCAATTGGGTCATTCATGTTCTTGGGACCTACTGGTGTTGGTAAGACTGAA
TTAGCTAAAGCTTTGGCTGAACTTCTCTTTGATGATGAATCAGCACTTATTCGTTTTGATATGTCTGAATACATGGAAAA
ATTTGCGGCGAGTCGTTTGAACGGAGCTCCTCCAGGATATGTTGGTTATGAAGAAGGTGGCGAATTGACTGAAAAAGTTC
GTAACAAACCTTATTCAGTGCTTCTTTTTGATGAGGTTGAAAAAGCTCACCCAGATATTTTCAACGTCCTTCTTCAAGTT
TTGGATGATGGTGTGTTGACAGATAGTCGTGGTCGTAAAGTTGATTTCTCAAATACGATTATTATCATGACGTCAAACCT
TGGTGCGACAGCTCTTCGTGATGATAAAACTGTTGGATTTGGTGCGCGTGATATGGCTCATGATTATGATGCTATGCAAA
AACGTATCATGGAAGAACTTAAGAAAGCTTATCGTCCAGAATTTATCAACCGTATTGATGAAAAGGTTGTCTTCCACCAC
TTGACACAAGAAAATATGCGTGACGTGGTTAAAATCATGGTTAAACCATTGGTTGCAACCTTAGCTGAAAAAGATATTAC
GCTTAAATTCCAACCATCAGCACTTAAATATCTTGCTGAGGCTGGATATGACCCAGAAATGGGAGCTCGTCCACTTCGTC
GTACTCTCCAAGATAAAGTTGAAGATAAATTATCAGAGCTTATCCTAGCAGGCGACCTAGCAAGTGGAAATACCCTTAAA
ATTGGTGTTTCTAAAGGACAACTCAAATTTGATATTGCTTAA
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTATCAGGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCAGCTGTTTTGGCACTCGGGAAATCACCTTTGGCAGATGTTAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCTTAAAAGACGTCTTAACTTTTGCTGAGTCAATTTGCAAAGTGACTGGCAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTGCGTAAATCATTGTCACGTAATGCTGGATTTACTAAAGAA
AAAATCAAAGCTATTCACGATCTTCGCAAACCCAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTAACTGAATTAGCTCGTCAAGGAAAACTTGAACCAGTTATTG
GTCGTGATAAAGAAATTTCACGTATGGTTCAAGTCCTTAGCCGTAAAACTAAAAACAACCCTGTCTTGGTCGGTGAAGCT
GGTGTTGGTAAAACAGCTCTTGCTTATGGTTTGGCACAACGAATTATTGATGGTGAGATTCCATACGAACTTCAAGACAT
GCGTGTTCTAGAACTTGATATGATGAGTGTTGTGGCTGGTACGCGTTTCCGCGGTGACTTCGAAGAACGCATGAATCAAA
TCATCTCTGATATTGAAGAAGATGGTCACATCATTTTATTCATCGATGAAGTGCACACTATTATGGGATCTGGTTCTGGA
ATTGATAGTACTTTAGATGCTGCTAATATTTTAAAACCAGCTCTTGCACGTGGGACACTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAGCATATTGAAAAAGATGCTGCGCTTTCTCGTCGTTTTGCTAAAATCACCATCGAAGAACCAA
GTGTTGAAGATGCTTATCAAATTTTACTTGGGCTTAAGAAATCTTACGAAACTTTCCATAATGTGACGATTTCTGATCAA
GCTGTGTTGACGGCTGTTAAAGCTGCACACCGTTATTTGACAAGTAAAAATCTACCAGATTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACTGTTCAAGGTTTGGTTAAAAAAGAAGCCCCAGAAGCTCTTACAGCTGCAGATAAAGCTATTTTAG
AAGGTGATTTCAAAAAAGCTACGAAATTGCTGAAAGCTTCACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGATATCATGGCAACACTTAGCCGTCTGTCAGGTATTCCTGTTGAAAAAATGACGCAAGCTGACAGTAAGAAATATTT
GACGCTTGAAAAAGAGCTTCACAAACGTGTGATTGGTCAAGATGCTGCTATTTCAGCGATTAGCCGAGCAATCCGTCGTA
ATCAAGCAGGTATCCGCACAGGAAAACGTCCAATTGGGTCATTCATGTTCTTGGGACCTACTGGTGTTGGTAAGACTGAA
TTAGCTAAAGCTTTGGCTGAACTTCTCTTTGATGATGAATCAGCACTTATTCGTTTTGATATGTCTGAATACATGGAAAA
ATTTGCGGCGAGTCGTTTGAACGGAGCTCCTCCAGGATATGTTGGTTATGAAGAAGGTGGCGAATTGACTGAAAAAGTTC
GTAACAAACCTTATTCAGTGCTTCTTTTTGATGAGGTTGAAAAAGCTCACCCAGATATTTTCAACGTCCTTCTTCAAGTT
TTGGATGATGGTGTGTTGACAGATAGTCGTGGTCGTAAAGTTGATTTCTCAAATACGATTATTATCATGACGTCAAACCT
TGGTGCGACAGCTCTTCGTGATGATAAAACTGTTGGATTTGGTGCGCGTGATATGGCTCATGATTATGATGCTATGCAAA
AACGTATCATGGAAGAACTTAAGAAAGCTTATCGTCCAGAATTTATCAACCGTATTGATGAAAAGGTTGTCTTCCACCAC
TTGACACAAGAAAATATGCGTGACGTGGTTAAAATCATGGTTAAACCATTGGTTGCAACCTTAGCTGAAAAAGATATTAC
GCTTAAATTCCAACCATCAGCACTTAAATATCTTGCTGAGGCTGGATATGACCCAGAAATGGGAGCTCGTCCACTTCGTC
GTACTCTCCAAGATAAAGTTGAAGATAAATTATCAGAGCTTATCCTAGCAGGCGACCTAGCAAGTGGAAATACCCTTAAA
ATTGGTGTTTCTAAAGGACAACTCAAATTTGATATTGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
77.094 |
99.877 |
0.77 |
| clpC | Streptococcus thermophilus LMG 18311 |
74.356 |
100 |
0.745 |
| clpC | Streptococcus thermophilus LMD-9 |
74.233 |
100 |
0.744 |
| clpC | Streptococcus pneumoniae TIGR4 |
68.35 |
99.877 |
0.683 |
| clpC | Streptococcus pneumoniae Rx1 |
68.35 |
99.877 |
0.683 |
| clpC | Streptococcus pneumoniae D39 |
68.35 |
99.877 |
0.683 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.58 |
100 |
0.508 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.735 |
100 |
0.446 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.794 |
78.967 |
0.362 |
| clpE | Streptococcus pneumoniae Rx1 |
45.794 |
78.967 |
0.362 |
| clpE | Streptococcus pneumoniae D39 |
45.794 |
78.967 |
0.362 |
| clpE | Streptococcus pneumoniae R6 |
45.794 |
78.967 |
0.362 |