Detailed information NTG0577481

Bioinformatically predicted

Overview

• Name: comD/comD3
• Type: Regulator
• Locus tag: KRG72_RS08235
• Genome accession: NZ_CP076703
• Coordinates: 1661200..1662282 (-)
• Length: 360 a.a.
• NCBI ID: WP_258254910.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain S1
• Function: phosphorylation of ComE (predicted from homology) Competence regulation

Genomic Context

Location: 1656200..1667282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KRG72_RS08210 (KRG72_08220)	rpe	1656574..1657236 (-)	663	WP_006531895.1	ribulose-phosphate 3-epimerase	-
KRG72_RS08215 (KRG72_08225)	rsgA	1657243..1658115 (-)	873	WP_006531894.1	ribosome small subunit-dependent GTPase A	-
KRG72_RS08225 (KRG72_08235)	comE/comE2	1658432..1659166 (-)	735	WP_258254908.1	LytTR family DNA-binding domain-containing protein	Regulator
KRG72_RS08230 (KRG72_08240)	comD/comD3	1659827..1661203 (-)	1377	WP_258254909.1	GHKL domain-containing protein	Regulator
KRG72_RS08235 (KRG72_08245)	comD/comD3	1661200..1662282 (-)	1083	WP_258254910.1	sensor histidine kinase	Regulator
KRG72_RS08240	comD/comD3	1662588..1663367 (-)	780	WP_258254911.1	sensor histidine kinase	Regulator
KRG72_RS08245 (KRG72_08255)	-	1664115..1664408 (-)	294	WP_205395459.1	bacteriocin immunity protein	-
KRG72_RS08250 (KRG72_08260)	-	1664436..1664741 (-)	306	WP_133018012.1	bacteriocin immunity protein	-
KRG72_RS08255 (KRG72_08265)	-	1664754..1664903 (-)	150	WP_039696228.1	hypothetical protein	-
KRG72_RS08260 (KRG72_08270)	-	1665147..1666457 (-)	1311	WP_258254918.1	sensor histidine kinase	-
KRG72_RS08265 (KRG72_08275)	comC/comC1	1666772..1666915 (+)	144	WP_160172983.1	hypothetical protein	Regulator

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 41057.19 Da
• Isoelectric Point: 4.8959

>NTDB_id=577481 KRG72_RS08235 WP_258254910.1 1661200..1662282(-) (comD/comD3) [Streptococcus equinus strain S1]
MILQGVYGYGILALFSIKLNPISMASASLGVIVGTITAVIIPPIFYYLVSNWLNIDISNVRKTLRNYLNVGTLRFVNVLL
LLFYPGMECFAAIAPFEDMSTNRNIYRAVIFLYFILLFIFLFYLNFRHGQEQKNELLRNQEMELSALENYSKHVESLYQE
VRSFRHDYANVLMSLKMGIDQGNLDDIKKIYDEITADSTKLVKNNKFDLTRLANITDSGVKSLMSAKFLQAENQGIAISL
EVSERMETPKIPLISYIRILSILFDNAIEAALESETPKISVANFYQDGDFVFMIENSSKEKSVDLGKIFERGYSTKGENR
GLGLATLMDFQDDYENLSVETHSSDYTFTQVVRIYEGDSR

Nucleotide

• Length: 1083 bp

>NTDB_id=577481 KRG72_RS08235 WP_258254910.1 1661200..1662282(-) (comD/comD3) [Streptococcus equinus strain S1]
ATGATTTTACAGGGAGTTTATGGCTATGGTATATTAGCACTCTTTTCAATAAAATTGAACCCAATTTCAATGGCTTCAGC
ATCGTTAGGAGTTATAGTTGGTACAATAACTGCAGTTATCATTCCACCGATTTTTTACTATTTAGTTTCAAACTGGTTAA
ACATTGATATTTCAAACGTTCGAAAAACGCTAAGAAATTACCTTAATGTAGGTACGCTCAGATTTGTCAATGTTTTATTA
CTACTTTTTTACCCAGGAATGGAATGCTTTGCGGCTATAGCGCCTTTTGAGGATATGTCAACGAATAGAAATATTTATAG
AGCAGTTATCTTCCTCTATTTCATTCTTCTTTTTATTTTCCTCTTCTATCTTAATTTCCGTCATGGGCAAGAGCAGAAAA
ACGAATTGCTTCGCAATCAGGAGATGGAGCTTTCGGCACTTGAAAATTATAGCAAGCACGTGGAAAGTTTGTATCAGGAA
GTACGCAGTTTCAGGCATGACTACGCCAATGTTCTGATGAGTTTAAAAATGGGGATTGACCAAGGCAATCTTGATGACAT
CAAGAAAATTTACGACGAAATCACAGCCGATTCGACGAAACTAGTCAAGAATAATAAATTTGATTTGACTCGTCTGGCTA
ACATCACAGACAGTGGTGTTAAAAGTCTTATGTCAGCTAAATTCTTGCAGGCTGAAAATCAAGGGATTGCGATTAGTTTG
GAAGTTTCAGAAAGAATGGAAACTCCCAAAATTCCTTTGATTTCTTATATCCGCATCTTGTCAATCCTTTTCGACAATGC
TATTGAAGCAGCTTTGGAGTCTGAAACTCCCAAAATTTCCGTGGCTAATTTCTACCAAGATGGTGATTTTGTTTTCATGA
TTGAAAATTCAAGTAAGGAAAAATCAGTGGATTTAGGCAAGATTTTTGAGCGAGGTTACTCAACCAAGGGTGAAAATCGT
GGCCTTGGTCTGGCAACACTAATGGATTTCCAAGATGACTACGAAAATCTGTCGGTTGAAACCCACAGTTCAGATTACAC
ATTCACACAAGTGGTGAGAATATATGAGGGAGATAGTAGATGA

Domains

Predicted by InterproScan.

• GHKL domain (HATPase_c_5) (257-354)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comD/comD3	Streptococcus equinus JB1	86.835	99.167	0.861
comD/comD2	Streptococcus equinus JB1	81.905	87.5	0.717