Detailed information NTG0577477

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MQV61_RS24020
• Genome accession: NZ_CP094339
• Coordinates: 4907288..4908313 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain W224N
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4902288..4913313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MQV61_RS24000	metJ	4903473..4903790 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MQV61_RS24005	yiiX	4903850..4904458 (+)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
MQV61_RS24010	rpmE	4904519..4904731 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MQV61_RS24015	priA	4904934..4907132 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
MQV61_RS24020	cytR	4907288..4908313 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MQV61_RS24025	ftsN	4908405..4909364 (+)	960	WP_000068834.1	cell division protein FtsN	-
MQV61_RS24030	hslV	4909457..4909987 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
MQV61_RS24035	hslU	4909997..4911328 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MQV61_RS24040	menA	4911395..4912321 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MQV61_RS24045	rraA	4912414..4912899 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MQV61_RS24050	zapB	4912984..4913229 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=577477 MQV61_RS24020 WP_000644904.1 4907288..4908313(+) (cytR) [Escherichia coli strain W224N]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=577477 MQV61_RS24020 WP_000644904.1 4907288..4908313(+) (cytR) [Escherichia coli strain W224N]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628