Detailed information NTG0057747

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: CCX78_RS04360
• Genome accession: NZ_AP017931
• Coordinates: 836035..837081 (+)
• Length: 348 a.a.
• NCBI ID: WP_096584883.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain LK-145
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 831035..842081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCX78_RS04330 (LASAK_00860)	-	832059..832355 (+)	297	WP_011374778.1	YlaN family protein	-
CCX78_RS04335 (LASAK_00861)	-	832364..833551 (+)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
CCX78_RS04340 (LASAK_00862)	-	833562..834650 (+)	1089	WP_011374776.1	CAP-associated domain-containing protein	-
CCX78_RS04345 (LASAK_00863)	-	834674..834964 (+)	291	WP_011374775.1	YlbG family protein	-
CCX78_RS04350 (LASAK_00864)	rsmD	834969..835523 (+)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CCX78_RS04355 (LASAK_00865)	coaD	835536..836033 (+)	498	WP_096584880.1	pantetheine-phosphate adenylyltransferase	-
CCX78_RS04360 (LASAK_00866)	sepM	836035..837081 (+)	1047	WP_096584883.1	SepM family pheromone-processing serine protease	Regulator
CCX78_RS04365 (LASAK_00867)	comEA	837153..837860 (+)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
CCX78_RS04370 (LASAK_00868)	-	837918..838406 (+)	489	WP_011374770.1	ComE operon protein 2	-
CCX78_RS04375 (LASAK_00869)	comEC	838403..840670 (+)	2268	WP_096584886.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CCX78_RS04380 (LASAK_00870)	holA	840667..841695 (+)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
CCX78_RS04385 (LASAK_00871)	rpsT	841764..842019 (-)	256	Protein_853	30S ribosomal protein S20	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38113.89 Da
• Isoelectric Point: 9.6357

>NTDB_id=57747 CCX78_RS04360 WP_096584883.1 836035..837081(+) (sepM) [Latilactobacillus sakei strain LK-145]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAHHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=57747 CCX78_RS04360 WP_096584883.1 836035..837081(+) (sepM) [Latilactobacillus sakei strain LK-145]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCCACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCGATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (210-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443