Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   KRG72_RS02600 Genome accession   NZ_CP076703
Coordinates   487865..488950 (+) Length   361 a.a.
NCBI ID   WP_074563228.1    Uniprot ID   A0AAE8L2Q8
Organism   Streptococcus equinus strain S1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 482865..493950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS02575 (KRG72_02575) - 483196..484404 (+) 1209 WP_258255752.1 MFS transporter -
  KRG72_RS02580 (KRG72_02580) asnA 484748..485740 (+) 993 WP_074563225.1 aspartate--ammonia ligase -
  KRG72_RS02585 (KRG72_02585) - 485841..486686 (-) 846 WP_258256235.1 hypothetical protein -
  KRG72_RS02590 (KRG72_02590) rsmD 486819..487358 (+) 540 WP_258255754.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  KRG72_RS02595 (KRG72_02595) coaD 487390..487887 (+) 498 WP_258255757.1 pantetheine-phosphate adenylyltransferase -
  KRG72_RS02600 (KRG72_02600) sepM 487865..488950 (+) 1086 WP_074563228.1 SepM family pheromone-processing serine protease Regulator
  KRG72_RS02605 (KRG72_02605) - 489081..489329 (+) 249 WP_014334393.1 DUF3923 family protein -
  KRG72_RS02610 (KRG72_02610) - 489432..490760 (+) 1329 WP_258255758.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  KRG72_RS02615 (KRG72_02615) - 490790..491350 (+) 561 WP_074563232.1 YutD family protein -
  KRG72_RS02620 (KRG72_02620) rlmN 491371..492471 (+) 1101 WP_039697319.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  KRG72_RS02625 (KRG72_02625) - 492481..492987 (+) 507 WP_258255760.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39225.43 Da        Isoelectric Point: 5.0954

>NTDB_id=577453 KRG72_RS02600 WP_074563228.1 487865..488950(+) (sepM) [Streptococcus equinus strain S1]
MTILNAFKGILKKLGRILYRFKWWILGVVGTVFLIFSLFYPLDYYVEMPGGAYDVRSVLTVNNKTDKDEGSYNFVAVTVS
QATLAQLVYAWLTPHTEISTAAATTGGYSNEDYMRINQYYMETSQNTATYQALTLAGKDVKLDYQGVYVLNVTKNSTFKG
LLHLADTVTGVNGKTFKSSQELMAYVADLDLGSKVTVQEISNGKTKEVSGKIIELPNGKNGIGIGLVDHTKVSSDVDVTF
DTSGVGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTIESDGSVGDIGGAGLKVVSAAKSGADIFFVPNNPVDKETLKK
DPDAKTNYEEAKEAAKDLDTDMKIVPVKNVQEAIDYLRSTN

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=577453 KRG72_RS02600 WP_074563228.1 487865..488950(+) (sepM) [Streptococcus equinus strain S1]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGTTAGGTCGTATTTTATACCGCTTTAAATGGTGGATACTAGG
AGTAGTGGGAACTGTATTTCTCATCTTTAGTTTATTTTATCCCCTCGACTATTATGTTGAAATGCCTGGGGGTGCTTATG
ATGTTCGTAGTGTTTTAACCGTTAATAACAAAACAGATAAAGACGAAGGTTCCTATAACTTTGTAGCGGTGACGGTGAGC
CAAGCGACGCTTGCTCAGCTGGTTTATGCTTGGTTAACACCGCATACGGAGATTTCAACGGCTGCCGCAACAACAGGTGG
CTACAGTAATGAAGATTACATGCGTATTAATCAATACTACATGGAAACTTCACAAAATACAGCGACCTACCAAGCTTTAA
CCCTAGCAGGAAAAGACGTTAAGCTTGATTATCAAGGTGTCTATGTCCTAAATGTAACCAAAAATTCAACCTTTAAAGGA
CTTTTACATCTAGCTGATACGGTTACTGGTGTAAATGGAAAAACGTTCAAGAGTTCACAAGAATTGATGGCTTATGTAGC
AGACTTGGATCTTGGCTCTAAAGTCACTGTTCAAGAAATTTCAAACGGTAAAACAAAAGAGGTTTCTGGTAAAATCATTG
AATTGCCAAATGGTAAAAATGGTATCGGTATTGGTCTGGTCGATCATACCAAGGTGTCATCTGATGTCGACGTGACTTTT
GATACCAGTGGTGTTGGTGGACCTAGTGCAGGCTTGATGTTCACCCTTGATATTTATGATCAAGTTAATAACGAAGATCT
TCGTAAAGGTCGTAAAATTGCTGGTACTGGTACCATTGAATCAGATGGTTCTGTTGGTGATATCGGCGGAGCAGGCTTAA
AAGTTGTCTCAGCTGCCAAATCTGGTGCAGATATTTTCTTTGTTCCAAATAATCCAGTCGATAAAGAAACATTGAAAAAA
GATCCTGATGCTAAGACAAATTACGAAGAAGCCAAAGAAGCTGCTAAAGACCTTGATACAGACATGAAGATTGTCCCTGT
CAAGAATGTCCAAGAAGCGATTGATTACCTAAGAAGTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.142

93.906

0.64