Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   MQV61_RS00815 Genome accession   NZ_CP094339
Coordinates   173846..174829 (+) Length   327 a.a.
NCBI ID   WP_001196477.1    Uniprot ID   A0A0H2VBW7
Organism   Escherichia coli strain W224N     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 168846..179829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQV61_RS00800 dppA 170146..171753 (+) 1608 WP_001222871.1 dipeptide ABC transporter substrate-binding protein DppA -
  MQV61_RS00805 dppB 171904..172923 (+) 1020 WP_000938855.1 dipeptide ABC transporter permease DppB -
  MQV61_RS00810 dppC 172933..173835 (+) 903 WP_000084677.1 dipeptide ABC transporter permease DppC -
  MQV61_RS00815 amiE 173846..174829 (+) 984 WP_001196477.1 dipeptide ABC transporter ATP-binding protein Regulator
  MQV61_RS00820 dppF 174826..175830 (+) 1005 WP_000103579.1 dipeptide ABC transporter ATP-binding subunit DppF -
  MQV61_RS00825 yhjV 175860..177131 (-) 1272 WP_001332306.1 aromatic amino acid transport family protein -
  MQV61_RS00830 - 177607..177714 (+) 108 WP_000170745.1 type I toxin-antitoxin system toxin Ldr family protein -
  MQV61_RS00835 - 178089..178196 (+) 108 WP_001295224.1 type I toxin-antitoxin system toxin Ldr family protein -
  MQV61_RS00840 - 178572..178679 (+) 108 WP_001295224.1 type I toxin-antitoxin system toxin Ldr family protein -

Sequence

Protein


Download         Length: 327 a.a.        Molecular weight: 35801.38 Da        Isoelectric Point: 6.5813

>NTDB_id=577404 MQV61_RS00815 WP_001196477.1 173846..174829(+) (amiE) [Escherichia coli strain W224N]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide


Download         Length: 984 bp        

>NTDB_id=577404 MQV61_RS00815 WP_001196477.1 173846..174829(+) (amiE) [Escherichia coli strain W224N]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(24-181)

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2VBW7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

43.302

98.165

0.425
  amiE Streptococcus thermophilus LMG 18311

42.991

98.165

0.422
  amiE Streptococcus thermophilus LMD-9

42.991

98.165

0.422
  oppD Streptococcus mutans UA159

41.379

97.554

0.404