Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUW75_RS04285 Genome accession   NZ_CP094264
Coordinates   972813..973613 (+) Length   266 a.a.
NCBI ID   WP_250334443.1    Uniprot ID   -
Organism   Streptomyces sp. MRC013     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 967813..978613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUW75_RS04270 (LUW75_04270) - 967910..968437 (+) 528 WP_250334441.1 TerD family protein -
  LUW75_RS04275 (LUW75_04275) - 968778..971647 (-) 2870 Protein_862 vitamin B12-dependent ribonucleotide reductase -
  LUW75_RS04280 (LUW75_04280) nrdR 971806..972318 (-) 513 WP_250334442.1 transcriptional regulator NrdR -
  LUW75_RS04285 (LUW75_04285) dinR/lexA 972813..973613 (+) 801 WP_250334443.1 transcriptional repressor LexA Regulator
  LUW75_RS04290 (LUW75_04290) - 973677..975644 (-) 1968 WP_250334444.1 ATP-dependent DNA helicase -
  LUW75_RS04295 (LUW75_04295) - 975980..977158 (+) 1179 WP_250334445.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 28698.54 Da        Isoelectric Point: 7.4237

>NTDB_id=577283 LUW75_RS04285 WP_250334443.1 972813..973613(+) (dinR/lexA) [Streptomyces sp. MRC013]
MTTTADSAAITAQDRSQGRFEPMHAMTVKNPDEAGTASEPAKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRG
YPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPADTTGKPAASYVPLVGRIAAGGPIL
AEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLP
HNAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 801 bp        

>NTDB_id=577283 LUW75_RS04285 WP_250334443.1 972813..973613(+) (dinR/lexA) [Streptomyces sp. MRC013]
GTGACCACCACCGCAGACAGCGCCGCCATCACCGCCCAGGACCGCTCCCAGGGCCGATTCGAACCGATGCACGCCATGAC
CGTGAAGAACCCGGACGAAGCGGGCACGGCTTCCGAGCCCGCCAAGCCCGCGCGCTCCCTCCCCGGCCGGCCCCCCGGCA
TCCGGGCCGACAGCTCCGGCCTCACGGACCGGCAGCGAAGGGTCATCGAGGTCATCCGCGACTCCGTGCAGCGGCGCGGG
TATCCGCCGTCGATGCGGGAGATCGGCCAAGCGGTCGGCCTCTCCAGCACGTCGTCGGTGGCGCACCAACTCATGGCCCT
GGAGCGCAAGGGGTTCCTCCGGCGGGACCCGCACCGGCCGCGCGCGTACGAGGTGCGGGGCTCCGACCAGCCGAGCACGC
AGCCCGCGGACACCACCGGGAAGCCCGCCGCGTCGTACGTCCCGCTCGTCGGCCGGATCGCCGCCGGCGGGCCGATCCTC
GCCGAGGAGTCGGTCGAGGACGTCTTCCCCCTCCCCCGGCAGCTGGTGGGCGACGGTGAGCTGTTCGTCCTGAAGGTCGT
GGGGGACTCCATGATCGAGGCCGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCGGAGAACGGCG
ACATCGTGGCCGCCATGCTGGACGGCGAGGCTACGGTCAAGCGCTTCAAGCGGGAGGACGGCCACGTCTGGCTGCTACCG
CACAATGCCGCCTACCAGCCCATCCCCGGCGACGAGGCCACCATCCTCGGCAAGGTGGTGGCGGTCCTGCGACGGGTCTG
A

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(59-122)

Peptidase S24-like (Peptidase_S24)

(148-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

79.699

0.368