Detailed information NTG0577222

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: KPF23_RS08990
• Genome accession: NZ_CP076675
• Coordinates: 1839382..1840485 (-)
• Length: 367 a.a.
• NCBI ID: WP_014938005.1
• Uniprot ID: J9R5B4
• Organism: Riemerella anatipestifer strain XG19
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1834382..1845485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KPF23_RS08965 (KPF23_08965)	comF	1835575..1836228 (-)	654	WP_038693798.1	ComF family protein	Machinery gene
KPF23_RS08975 (KPF23_08975)	-	1836455..1836970 (-)	516	WP_253072919.1	hypothetical protein	-
KPF23_RS08980 (KPF23_08980)	-	1837058..1837708 (-)	651	WP_014938007.1	HD domain-containing protein	-
KPF23_RS08985 (KPF23_08985)	gdhA	1837840..1839198 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
KPF23_RS08990 (KPF23_08990)	dprA	1839382..1840485 (-)	1104	WP_014938005.1	DNA-processing protein DprA	Machinery gene
KPF23_RS08995 (KPF23_08995)	-	1840488..1840865 (-)	378	WP_014938004.1	group III truncated hemoglobin	-
KPF23_RS09000 (KPF23_09000)	ruvC	1840876..1841430 (-)	555	WP_014938003.1	crossover junction endodeoxyribonuclease RuvC	-
KPF23_RS09005 (KPF23_09005)	-	1841483..1841956 (-)	474	WP_038693795.1	Lrp/AsnC family transcriptional regulator	-
KPF23_RS09010 (KPF23_09010)	-	1842304..1845234 (+)	2931	WP_038693793.1	SusC/RagA family TonB-linked outer membrane protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40200.07 Da
• Isoelectric Point: 6.6101

>NTDB_id=577222 KPF23_RS08990 WP_014938005.1 1839382..1840485(-) (dprA) [Riemerella anatipestifer strain XG19]
MVNAEEILYSIALRRSPLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILSNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPLVDVALTPVQKPIYDA
IKGGNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRKYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=577222 KPF23_RS08990 WP_014938005.1 1839382..1840485(-) (dprA) [Riemerella anatipestifer strain XG19]
ATGGTAAATGCAGAAGAAATTTTATATTCTATTGCTTTACGGCGAAGCCCTTTGGTGGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTAAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGGTTGGCACTAGGTACAGACGGGATAGCTCAT
CAAGAGGCTTTAAAAAATAACATAAAAACTTCAGCAGTTTTAGCACATGGTTTACATATTGTTTATCCGTCTAAACATAA
AATTCTTGCTGAAGAAATATTAAGTAATGGAGGAGCTTTGTTCTCTGAATTCTGCTCTGATGAAAAACCAGATAGAGAAC
ATTTTTTGCAAAGGAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCTGGCGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTCTTGCGGGGCGTCTTACTGATAAGTATAGCCA
AGGCTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTTAGTTGATGTCGCTTTAACTCCTGTTCAAAAACCTATTTATGATGCT
ATTAAAGGAGGTAATGATATTTCTTTAGATGACTTGTCAGAAAAATTAAATCAACCCATTTCTAAAGTGTTTCCAGTTTT
GTTAGAATTAGAATTATTGGGGTTGATAAGAGCAAATTCTGGGAGGAAATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-361)

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

3D structure

• AlphaFold DB: J9R5B4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	92.916	100	0.929