Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   MP387_RS04480 Genome accession   NZ_CP094226
Coordinates   914648..915112 (+) Length   154 a.a.
NCBI ID   WP_001135781.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 909648..920112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS04445 (MP387_04445) - 909918..910832 (+) 915 WP_242747979.1 peptidase -
  MP387_RS04450 (MP387_04450) - 910958..911500 (+) 543 WP_242747981.1 ClbS/DfsB family four-helix bundle protein -
  MP387_RS04455 (MP387_04455) - 911785..912288 (+) 504 WP_242747983.1 hypothetical protein -
  MP387_RS04460 (MP387_04460) - 912373..912789 (+) 417 WP_242747985.1 Imm70 family immunity protein -
  MP387_RS04465 (MP387_04465) - 912856..913548 (+) 693 WP_242747987.1 YjjG family noncanonical pyrimidine nucleotidase -
  MP387_RS04470 (MP387_04470) - 913572..913865 (+) 294 WP_033629749.1 hypothetical protein -
  MP387_RS04475 (MP387_04475) - 913985..914638 (+) 654 WP_242747989.1 uracil-DNA glycosylase -
  MP387_RS04480 (MP387_04480) mutX 914648..915112 (+) 465 WP_001135781.1 8-oxo-dGTP diphosphatase Machinery gene
  MP387_RS04485 (MP387_04485) - 915125..916393 (+) 1269 WP_242747991.1 dihydroorotase -
  MP387_RS04490 (MP387_04490) - 916435..917775 (+) 1341 WP_242747993.1 MATE family efflux transporter -
  MP387_RS04495 (MP387_04495) - 917954..918922 (+) 969 WP_084932536.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  MP387_RS04500 (MP387_04500) - 918939..919931 (+) 993 WP_242747995.1 alpha-ketoacid dehydrogenase subunit beta -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17842.19 Da        Isoelectric Point: 4.2287

>NTDB_id=577221 MP387_RS04480 WP_001135781.1 914648..915112(+) (mutX) [Streptococcus oralis strain 1648]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECATREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=577221 MP387_RS04480 WP_001135781.1 914648..915112(+) (mutX) [Streptococcus oralis strain 1648]
ATGCCTCAGTTAGCGACTATTTGCTACATTGATAACGGAAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCACGAAGGAAAATGGATTGGTGTGGGTGGTAAGCTAGAGCGAGGGGAGACACCTCAGGAGTGCGCAACGCGTGAAA
TCCTCGAAGAAACAGGGCTCAAAGCCAAGCCAGTACTTAAAGGTGTTATCACTTTTCCTGAATTTACGCCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTCGAGGGTGACTTGATTGACTGCAATGAGGGAACCTTAGAATGGGTTCC
CTATGATGAAGTCTTAAGCAAGCCGACTTGGGAAGGTGATCACACCTTTGTTGAGTGGCTTTTAGAGGACAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987