Detailed information NTG0576996

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: KPL75_RS12540
• Genome accession: NZ_CP076653
• Coordinates: 2354497..2355846 (-)
• Length: 449 a.a.
• NCBI ID: WP_219921107.1
• Uniprot ID: -
• Organism: Bacillus sp. NP247
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2349497..2360846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KPL75_RS27415	-	2352118..2352297 (-)	180	Protein_2498	WYL domain-containing protein	-
KPL75_RS12520 (KPL75_12515)	-	2352294..2352533 (+)	240	Protein_2499	VOC family protein	-
KPL75_RS12525 (KPL75_12520)	hpf	2352605..2353147 (-)	543	WP_000671183.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
KPL75_RS12530 (KPL75_12525)	cspC	2353469..2353666 (-)	198	WP_001990088.1	cold shock protein CspC	-
KPL75_RS12535 (KPL75_12530)	-	2353793..2354497 (-)	705	WP_219920855.1	ComF family protein	-
KPL75_RS12540 (KPL75_12535)	comFA	2354497..2355846 (-)	1350	WP_219921107.1	ATP-dependent helicase ComFA	Machinery gene
KPL75_RS12545 (KPL75_12540)	-	2355977..2357317 (-)	1341	WP_219920856.1	NlpC/P60 family protein	-
KPL75_RS12550 (KPL75_12545)	-	2357551..2357865 (-)	315	WP_002112882.1	helix-turn-helix domain-containing protein	-
KPL75_RS12555 (KPL75_12550)	-	2358039..2358881 (-)	843	WP_219920858.1	DegV family protein	-
KPL75_RS12560 (KPL75_12555)	-	2359274..2359909 (+)	636	WP_219920861.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51061.47 Da
• Isoelectric Point: 9.2464

>NTDB_id=576996 KPL75_RS12540 WP_219921107.1 2354497..2355846(-) (comFA) [Bacillus sp. NP247]
MLAGRQLLLEELSSDWQDKLDHLKKNREVVCVQGVIKKSSKYMCQRCGNMEQRLFASFLCKRCNKVCTYCRKCITMGRVS
ECAVLVRGIAEISGENYLNPLQWEGVLSAGQELAAQSVVDAVKQKESFFIWAVCGAGKTEMLFHGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPNINVAALYGGSLDREKDAALIVATTHQLLRYYRAFHVMIVDEIDAFPYHADKMLQYAVNEAM
KEKAAHIYLTATPDEKWKRKLRNGKQKGVIIPGRYHRHPLPVPAFRWCGNWKKDLMRNKIPRAVLQWLNMYLDKQYPIFL
FVPHIRYVEEISFLLKSINSQIDGVHAEDPKRKEKVAAFRKGEIPLLVTTTILERGITVKNLQVVVLGAEEEIFSESALV
QIAGRAGRSSDEPHGDVIYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=576996 KPL75_RS12540 WP_219921107.1 2354497..2355846(-) (comFA) [Bacillus sp. NP247]
ATGTTAGCTGGTAGACAGTTACTGTTAGAAGAACTTTCTTCAGATTGGCAGGATAAATTGGATCATTTGAAAAAGAATCG
AGAAGTCGTTTGTGTACAAGGGGTAATTAAGAAGTCTTCAAAATATATGTGCCAACGCTGCGGAAATATGGAGCAGCGGC
TATTTGCATCATTTCTATGTAAAAGATGCAATAAAGTATGTACGTATTGCCGAAAATGTATAACTATGGGCAGGGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAATAAGCGGAGAAAATTATTTGAATCCGTTACAGTGGGAAGGTGTTTT
GTCTGCTGGTCAGGAGTTAGCTGCGCAAAGTGTCGTTGACGCTGTTAAGCAGAAAGAATCATTTTTTATTTGGGCGGTGT
GCGGGGCTGGGAAGACAGAAATGTTGTTTCATGGAATTGCAGAAGCACTTCAAAAAGGAGAGAGAGTTTGTATTGCAACG
CCGAGAACGGACGTTGTACTTGAATTAGCACCAAGATTACAAGAAGTGTTTCCAAATATAAATGTAGCTGCTTTATACGG
AGGGAGTTTAGACCGAGAAAAAGATGCGGCGTTAATCGTTGCAACTACACATCAATTGTTACGTTATTATAGGGCGTTCC
ATGTCATGATTGTAGATGAGATAGATGCTTTTCCATATCATGCGGATAAGATGTTGCAGTATGCAGTAAACGAAGCGATG
AAAGAGAAAGCAGCACATATTTATTTAACGGCAACTCCAGATGAAAAGTGGAAGCGTAAATTGCGGAATGGTAAGCAAAA
AGGAGTTATTATTCCAGGGCGTTATCATCGTCATCCCTTGCCAGTTCCAGCATTTCGGTGGTGCGGAAATTGGAAAAAAG
ACCTCATGCGTAACAAAATCCCTCGGGCCGTATTACAATGGCTAAACATGTACTTAGATAAACAATATCCCATTTTTCTA
TTTGTTCCCCATATACGATACGTAGAAGAAATCAGCTTCTTATTAAAATCAATAAACAGTCAAATTGACGGTGTGCACGC
AGAAGATCCGAAGAGAAAAGAAAAGGTTGCGGCTTTTCGAAAGGGAGAAATTCCTTTATTAGTTACAACGACGATCTTGG
AACGAGGGATAACTGTGAAGAATTTACAAGTAGTAGTTTTAGGAGCAGAAGAAGAAATATTTTCAGAAAGTGCTCTCGTT
CAAATCGCAGGGCGCGCTGGTAGAAGTTCTGATGAACCGCATGGAGATGTTATCTATTTTCATTATGGAAAGACAGAGGC
GATGGTGCGTGCGAAAAAACATATTCAAAGTATGAATAAGAATGCTAAAGAACAAGGATTGATAGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-409)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.357	98.441	0.506