Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KPL75_RS07555 Genome accession   NZ_CP076653
Coordinates   1448445..1449239 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus sp. NP247     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443445..1454239
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPL75_RS07530 (KPL75_07525) - 1443593..1444321 (-) 729 WP_219920113.1 sigma-70 family RNA polymerase sigma factor -
  KPL75_RS07535 (KPL75_07530) - 1444613..1444912 (-) 300 WP_219920115.1 hypothetical protein -
  KPL75_RS07540 (KPL75_07535) - 1445026..1445799 (-) 774 WP_219920117.1 hypothetical protein -
  KPL75_RS07545 (KPL75_07540) - 1446145..1446504 (-) 360 WP_219920119.1 hypothetical protein -
  KPL75_RS07550 (KPL75_07545) - 1447308..1448279 (-) 972 WP_144504929.1 tyrosine-type recombinase/integrase -
  KPL75_RS07555 (KPL75_07550) spo0A 1448445..1449239 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  KPL75_RS07560 (KPL75_07555) spoIVB 1449526..1450818 (-) 1293 WP_219920121.1 SpoIVB peptidase -
  KPL75_RS07565 (KPL75_07560) recN 1450938..1452677 (-) 1740 WP_219920123.1 DNA repair protein RecN Machinery gene
  KPL75_RS07570 (KPL75_07565) argR 1452949..1453398 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=576983 KPL75_RS07555 WP_002015081.1 1448445..1449239(-) (spo0A) [Bacillus sp. NP247]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=576983 KPL75_RS07555 WP_002015081.1 1448445..1449239(-) (spo0A) [Bacillus sp. NP247]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGCTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAGAAGCAGCCTGATATACTCG
TTTTGGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATCGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACTAAAGTATTATATCCAGATATCGCAAAGAAATATAATACAACAGCAAGTCGTGTTGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818