Detailed information NTG0057686

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LEUCM_RS06825
• Genome accession: NZ_AP017929
• Coordinates: 1355702..1356748 (+)
• Length: 348 a.a.
• NCBI ID: WP_035145546.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1350702..1361748

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LEUCM_RS06795 (LACBS_01342)	-	1351726..1352022 (+)	297	WP_025015729.1	DUF1507 family protein	-
LEUCM_RS06800 (LACBS_01343)	-	1352031..1353218 (+)	1188	WP_025015730.1	FtsW/RodA/SpoVE family cell cycle protein	-
LEUCM_RS06805 (LACBS_01344)	-	1353229..1354317 (+)	1089	WP_025015731.1	CAP-associated domain-containing protein	-
LEUCM_RS06810 (LACBS_01345)	-	1354341..1354631 (+)	291	WP_016265218.1	YlbG family protein	-
LEUCM_RS06815 (LACBS_01346)	rsmD	1354636..1355190 (+)	555	WP_016265217.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LEUCM_RS06820 (LACBS_01347)	coaD	1355203..1355700 (+)	498	WP_025015732.1	pantetheine-phosphate adenylyltransferase	-
LEUCM_RS06825 (LACBS_01348)	sepM	1355702..1356748 (+)	1047	WP_035145546.1	SepM family pheromone-processing serine protease	Regulator
LEUCM_RS06830 (LACBS_01349)	comEA	1356824..1357531 (+)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
LEUCM_RS06835 (LACBS_01350)	-	1357589..1358077 (+)	489	WP_011374770.1	ComE operon protein 2	-
LEUCM_RS06840 (LACBS_01351)	comEC	1358275..1360341 (+)	2067	WP_231953244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LEUCM_RS06845 (LACBS_01352)	holA	1360338..1361366 (+)	1029	WP_025015735.1	DNA polymerase III subunit delta	-
LEUCM_RS06850 (LACBS_01353)	rpsT	1361434..1361688 (-)	255	WP_011374767.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38125.90 Da
• Isoelectric Point: 9.5178

>NTDB_id=57686 LEUCM_RS06825 WP_035145546.1 1355702..1356748(+) (sepM) [Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLDNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPGTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=57686 LEUCM_RS06825 WP_035145546.1 1355702..1356748(+) (sepM) [Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13]
ATGCCCAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACAGTTGGTGTCAGAGGCCCAGTAACACCATTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGACAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAGTTACCAGGCACGCATCATCCAGGTCTTGGGATTACGT
TAACCGATCACTCTAAGATTGAGACTGATATTCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (221-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443