Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   KMZ14_RS03510 Genome accession   NZ_CP076603
Coordinates   730054..734553 (+) Length   1499 a.a.
NCBI ID   WP_273798572.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain MCDA01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 725054..739553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMZ14_RS03485 (KMZ14_03480) - 725477..726136 (-) 660 WP_273798570.1 hypothetical protein -
  KMZ14_RS03490 (KMZ14_03485) pilG 726444..726827 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  KMZ14_RS03495 (KMZ14_03490) - 726858..727226 (+) 369 WP_004814764.1 response regulator -
  KMZ14_RS03500 (KMZ14_03495) - 727232..727768 (+) 537 WP_273798571.1 chemotaxis protein CheW -
  KMZ14_RS03505 (KMZ14_03500) - 727813..729885 (+) 2073 WP_163169303.1 methyl-accepting chemotaxis protein -
  KMZ14_RS03510 (KMZ14_03505) chpA 730054..734553 (+) 4500 WP_273798572.1 Hpt domain-containing protein Regulator
  KMZ14_RS03515 (KMZ14_03510) - 734557..735018 (+) 462 WP_273798573.1 hypothetical protein -
  KMZ14_RS03520 (KMZ14_03515) dapE 735092..736228 (-) 1137 WP_034424926.1 succinyl-diaminopimelate desuccinylase -
  KMZ14_RS03525 (KMZ14_03520) - 736353..736502 (-) 150 WP_004814773.1 entericidin A/B family lipoprotein -
  KMZ14_RS03530 (KMZ14_03525) - 736641..737489 (-) 849 WP_273798574.1 DUF1853 family protein -
  KMZ14_RS03535 (KMZ14_03530) - 737578..737973 (+) 396 WP_008307518.1 YbaN family protein -
  KMZ14_RS03540 (KMZ14_03535) elsL 737978..738484 (+) 507 WP_273798575.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1499 a.a.        Molecular weight: 166956.64 Da        Isoelectric Point: 4.2335

>NTDB_id=576589 KMZ14_RS03510 WP_273798572.1 730054..734553(+) (chpA) [Acinetobacter schindleri strain MCDA01]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNTLLPQWFATPDHQETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWAVEDTLNRVLSGSIKLTPVIQKFAQATLNIYQYVLYPCFKQVQPLTVDLRPVVLLGQQLQQQLSPEPALEELLLL
ADNLNAEGQLTGLELADTAEADSSGVEIAETTTAERVEVAEERTDLEETVAIFVEEAEEHLATIHDFLKHENSAKQDYNG
LIRALHTLRGSSSMAQIDDICEASVKVENLFKTLVQDEIASTSKETALLQQYSEFIGDYLHLLKQGNTEKLAGISATFED
AWDAYGFTVTEEQDADQSQGMVTRLVELNIDQLLDAEFEFDKRVLEEYPDYIEALSQQAAELMVHTDNRASIGIHEFASQ
LKAAYDALLARPVLLESDYAFELFAQAHQEFIHLFDTLAAGQRVILNAEVEKLLADLSAFVQQDIEVFATDKVVVTEVPA
PVESDISTAVDFTGLSQRIVADRQQQDAEDANRDFDEDLLDIFLEEADELLAGIDEDLNTWSKEPENTHSLNNLMRYLHT
LKGGANMIAATHIGSIAHELESIYERVIRQQITVTPALIQIIRLVQDNVSDRIQSIRDDKIDYPAPEAIHMLQNIQALVA
GTATATPVAAIETVEAETSVEQEVIDDASESAEIVVESQALERVDSFETESVPASDEQIQEDQSGETLTAESAESMLADE
DDLQSIVEETFLEESQEILENAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMISNESIASIAYGLESAFEQFAVHHF
NSNAYDSLLQKTLKWLGQAIFDHDYNGFEQIKAALDAIEFVDVTAQLPERLTKTESLEVTTGFEFVQGDGTEPPNMMGEW
AENTSSDSSNEMIRISAELVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSE
NSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQ
RIVRQTSTTLNRPAELIVQNTEGELDRTILERLVNPFEHMLRNAIDHGLEDTAERLALNKPEVGSIVLNISRQGTDVIIS
FSDDGKGIDAESIRAKAISLGLIKAEQQVDQEELLQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKTLGGHVSVNSELG
KGTTFTIRVPTTVAVSDALMVKAGDQQFAISLAQIDRIVRIAPATLETYFNSKDDYFKIDGVNYKLRYLSEFVSNQPIPR
LNNVAHSLPVLLIKGNGGQSIALLVDQLVGSRAQIVVKPIGQQFANVGVIAGATILGDGQVCLILDGQNIARQVQATQRI
KQLSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTN
LVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANVQELIAAQQG

Nucleotide


Download         Length: 4500 bp        

>NTDB_id=576589 KMZ14_RS03510 WP_273798572.1 730054..734553(+) (chpA) [Acinetobacter schindleri strain MCDA01]
ATGAAAGAAATATTAAAAGATCTAGTTGAAACAACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAGATATTTGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAATACTTTATTGCCACAGTGGTTTGCCACACCAGATC
ATCAAGAAACATTAACCACCATTCGCCGCCATTTCCATACGCTGAAAGGTTCGGGTCGTATGGTCGGTGCGAAGCAGGCG
GGTGAAATTGCCTGGGCAGTTGAAGATACTTTGAACCGCGTACTTTCCGGTTCAATCAAATTAACGCCAGTCATTCAGAA
GTTCGCGCAAGCAACTTTAAATATCTATCAATATGTATTGTATCCATGCTTTAAGCAGGTACAGCCATTAACCGTGGATT
TACGTCCAGTCGTACTTTTAGGACAACAATTACAACAGCAATTGAGTCCAGAACCGGCACTTGAAGAATTATTGCTACTT
GCGGACAATCTGAATGCTGAAGGTCAGCTAACAGGTCTTGAACTTGCGGATACTGCAGAAGCAGATTCATCAGGAGTAGA
GATTGCTGAAACTACTACCGCAGAACGAGTAGAAGTTGCTGAAGAACGTACTGACCTTGAAGAAACGGTGGCGATCTTTG
TTGAAGAAGCCGAGGAACATCTTGCGACAATCCATGATTTCCTAAAACATGAAAATAGTGCCAAGCAAGACTATAATGGC
CTGATTCGTGCATTGCATACCCTGCGTGGCAGCTCTTCTATGGCACAAATTGATGATATCTGTGAGGCCAGCGTTAAAGT
AGAGAATTTATTTAAAACGCTGGTTCAGGATGAAATTGCTTCAACTTCCAAAGAAACAGCACTATTACAGCAATATTCAG
AATTTATCGGTGATTATTTACATCTATTGAAACAAGGTAACACTGAAAAGCTGGCAGGGATTTCTGCTACTTTTGAGGAT
GCCTGGGATGCCTATGGCTTTACTGTGACTGAAGAGCAGGATGCTGATCAATCTCAAGGTATGGTTACACGTCTGGTTGA
ACTGAATATTGATCAGTTGCTGGATGCCGAATTTGAGTTTGATAAGCGGGTACTTGAAGAATATCCAGATTATATTGAAG
CTTTAAGCCAGCAAGCCGCAGAGCTGATGGTACATACGGATAACCGTGCATCGATCGGTATTCATGAATTCGCATCCCAG
TTAAAAGCAGCTTATGATGCTTTGCTGGCGAGACCGGTCTTGCTTGAAAGTGATTATGCCTTTGAACTTTTTGCACAGGC
ACACCAGGAATTTATTCACCTGTTCGATACGCTCGCGGCAGGACAGCGGGTGATTTTGAATGCCGAAGTTGAAAAACTTC
TGGCGGATCTGTCTGCCTTTGTACAGCAAGACATCGAAGTATTCGCTACAGACAAAGTTGTTGTAACTGAGGTACCTGCG
CCAGTAGAGTCGGATATATCCACAGCAGTTGATTTTACTGGGCTCAGCCAGCGTATTGTAGCTGATCGTCAGCAGCAGGA
CGCTGAAGATGCCAACCGTGATTTCGATGAAGACTTGCTGGATATCTTCCTGGAAGAAGCAGATGAGTTGCTGGCAGGCA
TTGATGAAGACCTGAATACCTGGTCCAAAGAACCTGAAAATACCCACTCATTGAACAATCTGATGCGTTATTTGCATACC
CTGAAGGGGGGTGCAAACATGATTGCTGCCACACATATCGGTTCGATTGCACATGAGCTGGAAAGTATTTATGAACGCGT
GATCCGTCAGCAGATTACCGTAACACCTGCATTGATCCAGATTATCCGACTAGTACAGGATAACGTGTCAGACCGTATCC
AGAGTATTCGTGATGATAAGATTGATTATCCGGCACCTGAAGCTATTCATATGCTGCAAAATATCCAGGCACTTGTGGCT
GGAACAGCTACTGCAACTCCGGTGGCTGCTATTGAGACGGTAGAAGCAGAGACTTCTGTAGAACAAGAAGTTATTGACGA
TGCATCGGAATCTGCTGAGATCGTTGTGGAATCACAAGCGCTCGAGCGAGTAGACAGCTTTGAAACTGAATCTGTTCCTG
CATCAGATGAGCAAATTCAGGAAGATCAGTCAGGCGAAACACTTACGGCTGAGTCAGCTGAATCTATGCTTGCTGATGAA
GATGATCTGCAATCGATTGTTGAAGAAACCTTCCTGGAAGAATCGCAAGAGATTCTGGAAAATGCAGAAAAATTACTGAA
CCAATGGTTCGATCAGCGAAGTGATCGTAGCTTATTGCTGCAACTTCAGCGTGCTGCCCACAGTATTAAGGGTGGCGCCC
GCATGATCAGCAATGAAAGCATCGCAAGTATTGCTTATGGTCTGGAAAGTGCATTTGAACAATTTGCTGTTCATCATTTC
AACTCCAATGCCTATGACAGTCTGCTGCAAAAGACCCTGAAATGGCTGGGTCAAGCCATTTTTGATCATGATTACAATGG
TTTTGAGCAAATCAAAGCAGCGCTGGATGCGATTGAATTTGTAGATGTCACTGCACAGCTACCTGAACGTCTGACCAAAA
CTGAAAGTCTGGAAGTTACAACTGGCTTCGAGTTTGTTCAGGGTGATGGTACTGAACCACCAAATATGATGGGGGAGTGG
GCTGAGAACACCTCAAGCGATAGCAGTAACGAGATGATCCGTATTTCAGCTGAACTGGTCGAGAAGATGATTGACCTGTC
AGGCGAAAATGCAATTAACCGTTCGCGTATCGAGATGGATCTGGGACAGCTCGGCAATACCTTAAATGAGATGGAACTGG
CGATCAAACGTCTGGCTGATCAGCTGCGCCGTATGGAAGGCGAGCTGGAGTCTCAGATTATTGCCAAACATGGCTCAGAA
AACTCACGCTATGCTGACTTCGACCCCTTGGAGATGGACCAATATTCATCCCTGAACCAGTTATCTAAATCTCTTGCTGA
ATCTGCATCGGACTTGGTCGACTTTAAGACCACGTTGGCAGAAAAAATCCGTGATACCGAAGGTTTGCTATTGCAACAAT
CGCGTATCCAGGCTGAGATTCAGGAAAGCTTGATGCGCACCCGTCTGGTACCATTTGACCGTATGTTGCCACGTTTACAA
CGTATTGTGCGTCAAACTTCGACTACGCTAAACCGTCCGGCAGAGCTGATTGTTCAGAATACTGAAGGTGAACTCGACCG
TACCATTCTGGAACGTCTGGTAAACCCATTCGAGCACATGCTACGTAACGCGATTGACCATGGTCTGGAAGATACTGCAG
AACGGCTTGCGCTGAATAAGCCAGAAGTCGGTTCAATTGTCTTGAACATTAGCCGTCAGGGTACCGATGTAATTATCTCC
TTTAGTGATGATGGTAAGGGGATTGATGCGGAGAGTATTCGAGCTAAAGCCATCAGTCTGGGCTTGATCAAAGCGGAACA
GCAGGTAGATCAGGAAGAATTGCTGCAATTCATCTTCCATCCAGGTTTCAGTACGGCTAAAGCAGTCACCCAGATTTCTG
GTCGAGGTGTTGGTCTGGACGTGGTACAAAGCGAAATCAAAACGCTGGGCGGTCACGTTTCGGTAAATTCTGAACTGGGC
AAAGGCACGACCTTTACGATTCGCGTACCGACCACTGTGGCAGTCAGTGATGCCTTGATGGTGAAAGCGGGTGACCAGCA
ATTTGCTATTTCCCTGGCACAGATTGACCGTATTGTCCGTATTGCACCAGCAACACTGGAAACTTACTTCAACAGTAAGG
ATGATTACTTCAAGATTGATGGTGTGAACTACAAGCTGCGCTATCTGTCTGAGTTTGTCTCTAATCAGCCAATTCCACGT
TTGAATAATGTCGCACATTCATTACCAGTACTCCTCATCAAGGGTAATGGTGGTCAAAGTATCGCTTTGCTGGTGGATCA
ATTAGTTGGCTCACGTGCACAGATTGTAGTAAAACCAATTGGGCAGCAGTTTGCCAATGTAGGTGTAATTGCAGGGGCAA
CCATTCTTGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGGTTCAGGCGACTCAGCGTATC
AAACAGTTATCTGATCAGCAGGATCTGTCGCGTCGTGGTAATGCACGTCGTCTGGTCATGATTGTCGATGACTCGGTAAC
TGTACGTAAGGTAACGTCACGTCTGTTAGAGCGTCAGGGTTATGATATTGTCACTGCCAAAGATGGTGTCGACGCGATTG
AACAGCTGGAAAATGTCCGTCCAGATCTGATGTTGCTGGATATTGAAATGCCACGTATGGACGGTTTCGAAGTAACTAAC
CTGGTTCGCCATCATGATATTCACCGCAACTTGCCAATTATCATGATCACCTCACGTACTGGGGAGAAGCATCGTGAGCG
TGCCTTCAGTCTGGGTGTGACACACTATATGGGTAAACCGTTCCAGGAAGCGGAGCTGCTTGCCAATGTTCAAGAATTAA
TTGCTGCTCAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.77

100

0.621