Detailed information NTG0057654

Bioinformatically predicted

Overview

• Name: spo0J
• Type: Regulator
• Locus tag: LEUCM_RS02690
• Genome accession: NZ_AP017929
• Coordinates: 539096..539971 (-)
• Length: 291 a.a.
• NCBI ID: WP_025016425.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 534096..544971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LEUCM_RS02660 (LACBS_00523)	nrdI	534699..535166 (+)	468	WP_016264324.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	-
LEUCM_RS02665 (LACBS_00524)	-	535163..535831 (-)	669	WP_016264323.1	HAD hydrolase-like protein	-
LEUCM_RS02670 (LACBS_00525)	-	536212..536976 (-)	765	WP_025016424.1	prolyl oligopeptidase family serine peptidase	-
LEUCM_RS02675 (LACBS_00526)	-	537013..537687 (-)	675	WP_016264321.1	DUF1129 domain-containing protein	-
LEUCM_RS02680 (LACBS_00527)	ychF	537705..538805 (-)	1101	WP_011373736.1	redox-regulated ATPase YchF	-
LEUCM_RS02685 (LACBS_00528)	-	538829..539077 (-)	249	WP_016264320.1	DUF951 domain-containing protein	-
LEUCM_RS02690 (LACBS_00529)	spo0J	539096..539971 (-)	876	WP_025016425.1	ParB/RepB/Spo0J family partition protein	Regulator
LEUCM_RS02695	-	539961..540727 (-)	767	Protein_508	ParA family protein	-
LEUCM_RS02700 (LACBS_00532)	noc	540739..541638 (-)	900	WP_096695388.1	nucleoid occlusion protein	-
LEUCM_RS02705 (LACBS_00533)	rsmG	541638..542378 (-)	741	WP_011373731.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	-
LEUCM_RS02710 (LACBS_00534)	-	542747..544087 (+)	1341	WP_011373730.1	nucleobase:cation symporter-2 family protein	-

Sequence

Protein

• Length: 291 a.a.
• Molecular weight: 32425.41 Da
• Isoelectric Point: 9.8304

>NTDB_id=57654 LEUCM_RS02690 WP_025016425.1 539096..539971(-) (spo0J) [Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13]
MVNKNGKGLGRGLEAVFSAFEGPNKNRADELVEEIALEDIRPNPYQPRKTFDEAALAELAASIKKSGVFQPIIVRKSING
YELIAGERRFRASKLAGKTTIPAITRQFDEEAMMEIAVLENLQREDLTPLEEAQAYDTLLKKLNLTQAELSERLGKSRPY
IANYLRLLGLPADVKQLLQEGQLSMGQARTLLSLKKKSQISALAKRTIAESLTVRQLEQLVNQMNQTKAAKVAKTKIKSP
YIQASENQLVDKFDTKVNIAMNSKGRGKIEIDYGTVEDLNRILALLDVNID

Nucleotide

• Length: 876 bp

>NTDB_id=57654 LEUCM_RS02690 WP_025016425.1 539096..539971(-) (spo0J) [Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 strain LT-13]
ATGGTCAATAAAAATGGTAAAGGACTCGGTCGAGGACTCGAAGCTGTTTTTTCAGCATTTGAAGGACCCAATAAGAATCG
TGCGGATGAACTCGTTGAAGAGATTGCCCTCGAGGATATTCGTCCTAATCCTTATCAACCACGTAAAACGTTTGATGAAG
CGGCACTAGCGGAACTTGCTGCTTCCATTAAAAAATCAGGCGTTTTCCAACCGATTATTGTGCGTAAAAGCATTAATGGT
TACGAATTAATCGCTGGCGAACGTCGTTTCCGTGCTTCTAAATTAGCTGGCAAAACTACGATTCCAGCGATTACCCGTCA
ATTCGATGAAGAAGCGATGATGGAAATTGCAGTCTTGGAAAATCTTCAACGGGAAGATTTAACACCGCTAGAAGAAGCGC
AAGCCTACGACACCCTTTTGAAGAAGTTAAACTTAACGCAAGCTGAATTGTCAGAACGCTTAGGCAAGAGTCGCCCTTAC
ATTGCCAATTACTTACGCCTGTTGGGCTTGCCAGCAGATGTTAAGCAATTGTTGCAAGAAGGCCAACTCTCAATGGGACA
AGCACGGACGCTTTTATCATTGAAGAAAAAGAGTCAAATTAGCGCCCTCGCCAAGCGGACGATTGCCGAAAGTTTAACGG
TGCGCCAATTAGAACAACTCGTCAACCAAATGAATCAAACCAAAGCGGCTAAAGTCGCTAAGACTAAGATTAAATCACCT
TACATTCAAGCTAGTGAAAACCAATTAGTTGATAAATTCGATACCAAGGTTAATATTGCGATGAACAGTAAGGGCCGGGG
GAAAATCGAAATTGATTACGGCACGGTAGAGGATTTAAACCGAATCTTGGCTTTACTAGATGTCAATATTGATTAG

Domains

Predicted by InterProScan.

• Helix-turn-helix (HTH_3) (139-166)

• HTH domain found in ParB protein (HTH_ParB) (173-223)

• ParB/Sulfiredoxin domain (ParB_N) (33-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
spo0J	Streptococcus mutans UA159	42.629	86.254	0.368