Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KP626_RS00850 Genome accession   NZ_CP076563
Coordinates   184148..185908 (+) Length   586 a.a.
NCBI ID   WP_395977422.1    Uniprot ID   A0A8F2F263
Organism   Christensenella sp. MSJ-20     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 179148..190908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KP626_RS00825 (KP626_00825) - 179396..181084 (-) 1689 WP_395977412.1 FAD-dependent oxidoreductase -
  KP626_RS00830 (KP626_00830) trxA 181182..181487 (-) 306 WP_395977414.1 thioredoxin -
  KP626_RS00835 (KP626_00835) - 181600..182262 (-) 663 WP_395977416.1 Crp/Fnr family transcriptional regulator -
  KP626_RS00840 (KP626_00840) - 182539..183420 (+) 882 WP_395977418.1 aminoglycoside phosphotransferase family protein -
  KP626_RS00845 (KP626_00845) - 183642..184082 (+) 441 WP_395977420.1 MarR family winged helix-turn-helix transcriptional regulator -
  KP626_RS00850 (KP626_00850) rcrP 184148..185908 (+) 1761 WP_395977422.1 ABC transporter ATP-binding protein Regulator
  KP626_RS00855 (KP626_00855) rcrQ 185905..187761 (+) 1857 WP_395977424.1 ABC transporter ATP-binding protein Regulator
  KP626_RS00860 (KP626_00860) - 187884..189080 (+) 1197 WP_395977426.1 MFS transporter -
  KP626_RS00865 (KP626_00865) - 189249..189539 (+) 291 WP_395977428.1 hypothetical protein -
  KP626_RS00870 (KP626_00870) - 189529..190431 (+) 903 WP_395977430.1 F0F1 ATP synthase subunit A -
  KP626_RS00875 (KP626_00875) atpE 190465..190695 (+) 231 WP_395977432.1 ATP synthase F0 subunit C -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64706.24 Da        Isoelectric Point: 6.1395

>NTDB_id=576411 KP626_RS00850 WP_395977422.1 184148..185908(+) (rcrP) [Christensenella sp. MSJ-20]
MLKILKRLNAKEWAQVGISLIFIVLQVWLDLKLPDYMSEITQLTQTPGSALGEIWTAGGKMLLCALGSLASAIAVGFLAS
RIAASLSRRLRSMLFNQVDSFSMEEINRFSTASLITRSTNDVTQIQMLVTLGLQMIVKAPIMAVWAVTKIAGKGMEWTIT
TGITLALLMGLIALVMIFVMPKFRKMQVLTDNLNRVTRENLTGLRVVHAYNAEGYQEEKFEKANQELTATHLFTSRGMAI
LMPVMTTMMSGLSLAIDWIGAYLINAAAMTEKLTLFSNMVVFSSYAMQVIMAFVMMVMIFIMLPRAAVSARRINEVLDTE
PTIRDGHATEGKPGMEGEIAFRHVSFRYPGAADYVLHDVSFQVHQGETVAFIGSTGSGKSTLINLVPRFFDVTEGEVLVD
GVNVKDYKEEALYNKIGYVPQKAVLFKGTVASNVGYGDNGREEPTEEDIRTAVRIAQGADFVEKMEGQYHADISQGGTNV
SGGQKQRLAIARAVCRKPEIYIFDDSFSALDYKTDRILRSVLKQETAGVTSMIVAQRIGTIMDADQIIVLDEGRVVGKGT
HRELLDTCDVYREIAMSQLSEEELVS

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=576411 KP626_RS00850 WP_395977422.1 184148..185908(+) (rcrP) [Christensenella sp. MSJ-20]
ATGCTAAAAATTCTAAAGCGCCTAAACGCAAAGGAATGGGCGCAGGTGGGGATCAGTTTGATCTTCATCGTTCTGCAGGT
CTGGCTGGATCTGAAGCTGCCGGACTATATGTCTGAGATCACCCAGTTAACCCAAACCCCGGGCAGCGCCCTAGGGGAGA
TCTGGACGGCGGGAGGCAAGATGCTGCTATGCGCCTTAGGGAGCCTAGCTTCGGCCATTGCCGTGGGATTTCTCGCTTCC
CGGATCGCGGCGTCCCTGTCCCGACGGCTGCGGAGCATGCTGTTCAATCAGGTGGATTCCTTCTCCATGGAGGAGATCAA
CCGGTTTTCCACCGCCAGCCTCATCACCCGCTCCACCAATGATGTCACCCAGATTCAGATGCTGGTAACCCTGGGCCTTC
AGATGATCGTAAAGGCCCCCATCATGGCGGTTTGGGCGGTGACCAAGATCGCTGGCAAAGGGATGGAGTGGACCATCACC
ACCGGAATCACCCTGGCGCTTTTAATGGGGCTTATCGCGCTTGTGATGATCTTCGTGATGCCAAAATTTCGGAAGATGCA
GGTCTTGACCGACAACCTCAACCGGGTAACCCGGGAAAACCTCACCGGGCTGCGGGTGGTCCACGCCTACAACGCCGAGG
GCTACCAGGAGGAAAAGTTTGAAAAGGCCAATCAGGAGTTGACCGCCACCCATCTGTTCACCAGCCGGGGAATGGCTATC
CTGATGCCGGTGATGACCACCATGATGAGCGGCCTGTCCCTGGCCATCGACTGGATCGGCGCCTATCTCATCAACGCGGC
GGCTATGACCGAGAAACTGACTCTGTTTTCCAACATGGTGGTGTTCTCCTCCTATGCCATGCAGGTGATTATGGCCTTTG
TGATGATGGTGATGATCTTCATTATGCTGCCCCGGGCCGCGGTATCCGCCCGCCGGATCAACGAGGTTTTGGATACCGAG
CCCACCATCCGGGATGGCCATGCAACGGAGGGCAAACCGGGGATGGAGGGGGAGATCGCTTTTCGCCATGTGAGCTTCCG
GTACCCAGGCGCGGCGGACTATGTTCTCCACGATGTGAGCTTTCAGGTTCATCAAGGGGAGACGGTGGCCTTCATCGGCT
CTACCGGCAGCGGAAAAAGCACCCTTATCAACCTGGTACCCCGATTCTTTGACGTTACCGAGGGCGAAGTTCTTGTGGAT
GGTGTAAACGTTAAGGACTATAAGGAAGAAGCCCTATACAATAAGATTGGCTATGTACCGCAGAAGGCGGTGCTGTTCAA
AGGAACGGTTGCATCCAATGTTGGTTATGGAGACAATGGCCGGGAGGAGCCCACGGAGGAGGATATCCGCACCGCGGTGC
GGATCGCACAGGGCGCGGACTTTGTAGAAAAGATGGAGGGCCAGTATCACGCAGATATCTCCCAGGGAGGCACCAACGTG
TCGGGCGGGCAGAAGCAACGCCTGGCCATCGCCCGGGCGGTCTGCCGAAAGCCGGAAATCTATATCTTTGACGATAGCTT
TTCCGCTCTGGATTATAAGACCGACCGGATCCTGCGCTCGGTTTTAAAGCAGGAAACCGCCGGAGTTACCAGCATGATCG
TGGCCCAGCGTATCGGAACGATTATGGATGCCGATCAGATTATCGTGCTGGATGAAGGCAGGGTAGTGGGAAAGGGGACC
CATCGGGAGCTGCTGGATACCTGCGATGTCTATCGGGAGATTGCCATGTCCCAGCTAAGCGAGGAGGAACTTGTATCATG
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(61-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

54.027

100

0.549